Pairwise Alignments

Query, 443 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 477 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

 Score =  108 bits (269), Expect = 5e-28
 Identities = 66/162 (40%), Positives = 90/162 (55%), Gaps = 7/162 (4%)

Query: 273 MAHRDALTGAINRHGIRDWLQDQARLVRWQLNHVSVLFIDIDYFKQVNDVYGHSLGDDLL 332
           +A  D LTG +NR       + +        N VSVL IDID+FKQVND +GH++GD  L
Sbjct: 314 LATTDELTGCLNRRAFFVAAEQELERASRYGNAVSVLMIDIDHFKQVNDRHGHAVGDKAL 373

Query: 333 REFALVISREIRESDKLVRWGGEEFVVFCAQTTLEQAIELAERLRAKIADHSWIHGG--- 389
           +     I   +RE D   R GGEEF     +TTL  A+ +AERLR  +   +   G    
Sbjct: 374 KAATAAIRANLREIDSFGRLGGEEFAAMLPETTLAGALLVAERLRQAVEAIALPLGDDQP 433

Query: 390 --AITCSIGIA--QMGDERITETVSRADEALYRAKRLGRNRI 427
              +T S+G+A  Q G+  + + ++RAD ALYRAK  GRNR+
Sbjct: 434 PLRLTTSLGVAERQPGEVAVDQVLARADTALYRAKAEGRNRV 475