Pairwise Alignments

Query, 443 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 410 a.a., orf, hypothetical protein (VIMSS) from Escherichia coli BW25113

 Score =  112 bits (280), Expect = 2e-29
 Identities = 65/155 (41%), Positives = 86/155 (55%), Gaps = 1/155 (0%)

Query: 274 AHRDALTGAINRHGIRDWLQDQARLVRWQLNHVSVLFIDIDYFKQVNDVYGHSLGDDLLR 333
           AH DA+TG +NR       +             S+L ID D FK +ND+YGHS GD++L 
Sbjct: 253 AHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLC 312

Query: 334 EFALVISREIRESDKLVRWGGEEFVVFCAQTTLEQAIELAERLRAKIADHSWIHGGAITC 393
             A  +    R+ D + RWGGEEFV+   +T L+ A+ LAE +R  +A  S       T 
Sbjct: 313 ALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLPRFTV 372

Query: 394 SIGIA-QMGDERITETVSRADEALYRAKRLGRNRI 427
           SIG+A   G+E I E   R D+ALYRAK  GRNR+
Sbjct: 373 SIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRV 407