Pairwise Alignments

Query, 595 a.a., thiol reductant ABC exporter subunit CydD from Vibrio cholerae E7946 ATCC 55056

Subject, 616 a.a., Lipid A export ATP-binding/permease protein MsbA from Xanthobacter sp. DMC5

 Score =  159 bits (402), Expect = 3e-43
 Identities = 120/429 (27%), Positives = 201/429 (46%), Gaps = 16/429 (3%)

Query: 169 FLLTAPLVPLFMALVGI-----KAADASRKNFKALQRLSGHFYDRLQALTTIRLFDRTTA 223
           FL    LV +  A++G      KA       F +  +LS    +  Q + T++ +     
Sbjct: 176 FLAVIALVVMPAAVIGTRKLIKKAKTIFTTGFTSGVKLSSIVMEVFQGIRTVKAYTLEPV 235

Query: 224 ETEHMRGASEVFRHRTMDVLRIAFLSSAVLEFFTSISIALTAVYFGFSYIGELNFGYYGA 283
             E      +        ++R    SS ++E    ++I    +Y G++ I EL      +
Sbjct: 236 MRERTHKFIDDVEINANRLVRTQAKSSPLMETLGGLAIGGVILYAGYNVI-ELG----RS 290

Query: 284 SVTLFAGLFVLILAPEFYQPLRDLGTYYHAKQLAVGAAESIVDFLQTEVDTLHSGERHLS 343
               F+ L  L+LA   Y+P + L   +      V  A  + D L        S      
Sbjct: 291 PGQFFSVLTALLLA---YEPAKRLSRLHVELVSHVMGARMLFDLLDAPAPDADSSGVGAL 347

Query: 344 DNDDIEIIANDLVVLSPQGKRLAGPLSFTLQSGKTTALVGPSGAGKTSLINTILGFM-PY 402
                 +   D+V     G+ +   L    + G+TTALVG SG GKT++IN I  F  P 
Sbjct: 348 PRPRGRVEFKDVVFAYRPGENVLRSLDLVAEPGRTTALVGQSGGGKTTIINLIERFYDPQ 407

Query: 403 QGSLTINGIELRELDHAQWRQTISWVGQNPLLLYGTIRDNVTLGKHNIADEQVTQTLQAA 462
            G++ I+ ++ R +     R +++ V Q+  L  GTIR+N+  G+   ++E++    +AA
Sbjct: 408 SGAVLIDDVDTRSVSRTSVRASVALVSQDVYLFSGTIRENIGFGRPGASEEEIVAAAKAA 467

Query: 463 YAQEFVE--QQGLDYPISDRSAGLSVGQAQRLALARAILQNGRFWLLDEPTASLDARSEQ 520
           +A  F+   + G D  + +  A LS GQ QR+A+ARA L+N    LLDE TA+LD+ SE 
Sbjct: 468 HAHPFIMSFENGYDTAVGEHGAQLSGGQRQRIAIARAFLKNAPILLLDEATAALDSESEA 527

Query: 521 YVMRGLTESIQQRTALFVTHQLQPLQSVEQILVMENGLLVQAGHFEDLSQQSGLFATMLA 580
            V + L E   +RT + + H+LQ +   ++I V+E G +V++G  ++L  + G +     
Sbjct: 528 EVQKALAELAHERTTIVIAHRLQTVVRADRICVIEGGRVVESGTHDELIARRGRYYGFYF 587

Query: 581 ANQALQAAN 589
           A  A ++ N
Sbjct: 588 AQFAHESEN 596