Pairwise Alignments

Query, 595 a.a., thiol reductant ABC exporter subunit CydD from Vibrio cholerae E7946 ATCC 55056

Subject, 604 a.a., Multidrug resistance ABC transporter ATP-binding/permease protein BmrA from Xanthobacter sp. DMC5

 Score =  154 bits (388), Expect = 1e-41
 Identities = 153/568 (26%), Positives = 252/568 (44%), Gaps = 31/568 (5%)

Query: 26  IAVGLGVLSSLFLVAQAALLASILHQLIIEQVDKHL-LIPHFFG-LAALIAVRALCSWGR 83
           +A  LG L +  L A  AL  ++   +     + H  L+  +FG L A+ AV AL S  R
Sbjct: 44  VAAALGALLAAAL-ATLALPIAVRRMIDFGFAEDHAGLVDQYFGVLVAVAAVLALASAAR 102

Query: 84  EIAGFRCGEEIRRYIRQLILDKLRDLGPAYIKGKPAGSWAALMLEQVENMHDFFARYLPQ 143
                  GE +   +R  +  +L  L  A+     +G   + +      +          
Sbjct: 103 YYLVTTLGERVVSDLRTAVFARLVTLDGAFYDSARSGELTSRLTADTTQLKSAVGASAST 162

Query: 144 MSLSVLVPFVILAVVFPVNWAAGLIFLLTAPLVPLFMALVGIKAADASRKNFKALQRLSG 203
              ++++    +A++   +     + L+  P++ L +   G K    +R+    L   S 
Sbjct: 163 ALRNLMMCIGSVAMMVVTSPRLSGLVLVAIPIIVLPLMASGRKVRRLTRQAQDTLADASA 222

Query: 204 HFYDRLQALTTIRLFDRTTAETEHMRGASEVFRHRTMDVLRIAFLSSAVLEFFTSISIAL 263
           +  + L ++  ++         +   GA E       +    A  ++    + T I+I L
Sbjct: 223 YAAEALNSMRALQAASAEGVARQRFDGAVE-------EAFGAARQATQARGWLTGIAIFL 275

Query: 264 TAVYFGFSYIGELNFGYY----GASVTLFAGLFVL--ILAPEFYQPLRDLGTYYHAKQLA 317
               FG S +  L  G      G   +   G FVL  +LA      L +L   +     A
Sbjct: 276 V---FG-SVVAVLWAGAQSVLAGTMTSGALGQFVLYAVLAAA---SLGNLSETWGEMSAA 328

Query: 318 VGAAESIVDFLQTEVDTLHSGERHLSDNDDIEIIANDLVVLS----PQGKRLAGPLSFTL 373
            GAAE I + L+ E                   I  D V  S    P    LA  ++F++
Sbjct: 329 AGAAERIGELLKVEPQVRPPARPVPLPARISGAIRFDEVSFSYPTRPDQSALAA-IAFSI 387

Query: 374 QSGKTTALVGPSGAGKTSLINTILGFM-PYQGSLTINGIELRELDHAQWRQTISWVGQNP 432
           + G+  ALVGPSGAGK+++   +  F  P  G + ++GI++RE D    R+ ++ V Q  
Sbjct: 388 RPGERVALVGPSGAGKSTVFQLLERFYDPQAGRILLDGIDIREADPVAVRRQMALVPQEV 447

Query: 433 LLLYGTIRDNVTLGKHNIADEQVTQTLQAAYAQEFVEQ--QGLDYPISDRSAGLSVGQAQ 490
            +   ++R N+ LG+    D +V +  +AA   EFV +  QG D  + +R   LS GQ Q
Sbjct: 448 AIFADSVRANIRLGRPEATDAEVEEAGRAALVDEFVARLPQGWDTMVGERGVMLSGGQRQ 507

Query: 491 RLALARAILQNGRFWLLDEPTASLDARSEQYVMRGLTESIQQRTALFVTHQLQPLQSVEQ 550
           R+ +ARAIL+     LLDE T++LDA SE  V   L  S++ RT L + H+L  + S ++
Sbjct: 508 RIVIARAILRGAPILLLDEATSALDAESETLVQTALERSMEGRTTLVIAHRLSTVLSADR 567

Query: 551 ILVMENGLLVQAGHFEDLSQQSGLFATM 578
           ILVME G ++  G   +L  + GL+A +
Sbjct: 568 ILVMEAGRIMDEGTHAELVAKGGLYARL 595