Pairwise Alignments

Query, 595 a.a., thiol reductant ABC exporter subunit CydD from Vibrio cholerae E7946 ATCC 55056

Subject, 598 a.a., Beta-(1-->2)glucan export ATP-binding/permease protein NdvA from Xanthobacter sp. DMC5

 Score =  154 bits (388), Expect = 1e-41
 Identities = 126/487 (25%), Positives = 224/487 (45%), Gaps = 53/487 (10%)

Query: 119 AGSWAALMLEQVENMHDFFARYLPQMSLSVLVPFVILAVVFPVNWAAGLIFLLTAPLVPL 178
           +G    +MLE V+ +   +  +  +   ++L   +++ V   +NW  GL+ ++   +  +
Sbjct: 121 SGRLLKVMLEGVDALWGLWLSFFREDCAAILSLVILVPVGIYLNWRLGLVLIVLMAVFGV 180

Query: 179 FMALVGIKAADASRKNFKALQRLSGHFYDRLQALTTIRLFDRTTAETEHMRGASEVFRHR 238
             A V  +     R+  +    L+    D L  +  I+ + RT AE   +R         
Sbjct: 181 VTAYVISRTEAMQRQVEEYNSDLAEQTSDALGNVAVIQSYTRTEAEVSGLRDT------- 233

Query: 239 TMDVLRIAFLSSAVLEFFTSISIALTAVYFGFSYIGELNFGYYGASVTLFAGLFVLILAP 298
              V R+  +   VL ++  +S+A  A                    T    L +L++  
Sbjct: 234 ---VNRVLAVQIPVLSWWAMVSMATKAA-------------------TTLTILAILLIGT 271

Query: 299 EFYQP----LRDLGTYYHAKQLAVGAAESIVDFLQTEVDTLHSGERHLSDNDDIEIIAN- 353
             Y      + D+ TY     + +G  +  V F    + +     +     D +  + + 
Sbjct: 272 WLYMQGLANIGDIVTYVAFANMLIGRLDHTVSFFNRLMMSAPQLAQFFDVLDTVGAVRDR 331

Query: 354 ---------------DLVVLSPQGKRLA-GPLSFTLQSGKTTALVGPSGAGKTSLINTIL 397
                          D V  S  GKR A   +SF  + G+T A VG +GAGK++ +  + 
Sbjct: 332 PGAKPLPPVKGDVTFDDVSFSYDGKRTAVADVSFHAEPGQTFAFVGTTGAGKSTALALLH 391

Query: 398 G-FMPYQGSLTINGIELRELDHAQWRQTISWVGQNPLLLYGTIRDNVTLGKHNIADEQVT 456
             F P  G++ I+G ++R++  +  R  I  V Q PLL   +I DN+ +GK +  + ++ 
Sbjct: 392 RVFDPQSGAIRIDGEDIRDVTLSSLRHAIGVVFQEPLLFNRSIADNLKVGKPDATEAEMR 451

Query: 457 QTLQAAYAQEFVEQQ--GLDYPISDRSAGLSVGQAQRLALARAILQNGRFWLLDEPTASL 514
           + L  A A E VE+   GL   + +R   LS G+ QRL++ARA+L+N    +LDE T++L
Sbjct: 452 EALARAQALELVERNPLGLQAVVGERGRALSGGERQRLSIARALLKNPPILILDEATSAL 511

Query: 515 DARSEQYVMRGLTESIQQRTALFVTHQLQPLQSVEQILVMENGLLVQAGHFEDLSQQSGL 574
           DA +E  V   L E ++ RT   + H+L  +++ ++ILV E+G +V+AG F++L +  G 
Sbjct: 512 DAATEVKVQAALDEVMKGRTTFVIAHRLATVRNADRILVFEHGRVVEAGSFDELVRLGGR 571

Query: 575 FATMLAA 581
           FA +  A
Sbjct: 572 FAGLARA 578