Pairwise Alignments

Query, 595 a.a., thiol reductant ABC exporter subunit CydD from Vibrio cholerae E7946 ATCC 55056

Subject, 601 a.a., lipid transporter ATP-binding/permease from Pseudomonas simiae WCS417

 Score =  153 bits (387), Expect = 2e-41
 Identities = 124/439 (28%), Positives = 219/439 (49%), Gaps = 24/439 (5%)

Query: 150 VPFVILAVVFPVNWAAGLIFLLTAPLVPLFMALVGIKAADASRKNFKALQRLSGHFYDRL 209
           V F+  +++F +NW   L+ +   PL+ + ++    K    S+K   A+  ++    + +
Sbjct: 167 VIFLFASLLF-MNWRLTLVMIAILPLIAVMVSTASKKFRKQSKKIQVAMGDVTHVASETI 225

Query: 210 QALTTIRLFDRTTAETEHMRGASEVFRHRTMDVLRIAFLSSAVLEFFTSISIALTAVYFG 269
           Q    +R F     E +    AS+   ++ + + R   + +  L+    I  A+  + F 
Sbjct: 226 QGYRVVRSFGGEVYEEKRFLKASQSNTNKQLRMTRTGAIYTPALQLV--IYTAMAVLMFL 283

Query: 270 FSYI-GELNFGYYGASVTLFAGLFVLILAPEFYQPLRDLGTYYHAKQLAVGAAESIVDFL 328
             Y+ G+ + G   A +TL AGL          +P+R L       Q  V  AESI + L
Sbjct: 284 VLYLRGDASAGDMVAYITL-AGLLP--------KPIRQLSEVSSTIQKGVAGAESIFEQL 334

Query: 329 QTEVDTLHSGERHLSDNDDIE--IIANDLVVLSPQGKR-LAGPLSFTLQSGKTTALVGPS 385
             EV+     +R   + D +   +   +L    P  +R +   +SFT + G+  ALVG S
Sbjct: 335 DEEVEV----DRGTIERDKVSGRLDVRNLNFTYPGTERHVLKDISFTAEPGQMIALVGRS 390

Query: 386 GAGKTSLINTILGFMPYQ-GSLTINGIELRELDHAQWRQTISWVGQNPLLLYGTIRDNVT 444
           G+GK++L + I  F  ++ G + ++GIE+        R+ I+ V Q+  L   T+ +N+ 
Sbjct: 391 GSGKSTLASLIPRFYHHESGEILLDGIEIENYKLLNLRKHIAQVTQHVTLFSDTVTNNIA 450

Query: 445 LGKHNIADEQVTQTLQA-AYAQEFVEQ--QGLDYPISDRSAGLSVGQAQRLALARAILQN 501
            G    A     +   A A A++F++Q  +G D  + +    LS GQ QRLA+ARA+L+N
Sbjct: 451 YGDLAGAPRAEVEAAAADANAKDFIDQLPKGFDTQVGENGVLLSGGQRQRLAIARALLKN 510

Query: 502 GRFWLLDEPTASLDARSEQYVMRGLTESIQQRTALFVTHQLQPLQSVEQILVMENGLLVQ 561
               +LDE T++LD  SE+++   L + +Q RT L + H+L  ++  + ILVM++G +V+
Sbjct: 511 APLLILDEATSALDTESERHIQAALDKVMQGRTTLVIAHRLSTIEKADLILVMDDGRIVE 570

Query: 562 AGHFEDLSQQSGLFATMLA 580
            G   +L  Q+G +A + A
Sbjct: 571 RGTHGELLAQNGYYARLHA 589