Pairwise Alignments

Query, 595 a.a., thiol reductant ABC exporter subunit CydD from Vibrio cholerae E7946 ATCC 55056

Subject, 673 a.a., Efflux ABC transporter, permease/ATP-binding protein Reut_A2584 from Variovorax sp. SCN45

 Score =  157 bits (396), Expect = 2e-42
 Identities = 139/619 (22%), Positives = 264/619 (42%), Gaps = 52/619 (8%)

Query: 2   DKKKQRSLNLW----LKQQSKLAKRWLAIAVGLGVLSSLFLVAQAALLASILHQLII--- 54
           D ++Q   + W    L + +K  ++ L +   L ++S+   +    L   ++  ++I   
Sbjct: 55  DAERQSPPSTWVLLRLGRFAKPYRKQLILGFVLTLISTAATLVPPYLTIPLMDDILIPFQ 114

Query: 55  --EQVDKHLLIPHFFGLAALIAVRALCSWGREIAGFRCGEEIRRYIRQLILDKLRDLGPA 112
             +++D   +  +  GL     V     W R        E I   +R    + L  L   
Sbjct: 115 NGQKIDTMRVGLYLGGLLVAALVGWGLGWARTYLLALVSERIGADLRTTTYEHLLTLPLD 174

Query: 113 YIKGKPAGSWAALMLEQVENMHDFFARYLPQMSLSVLVPFVILAVVFPVNWAAGLIFLLT 172
           Y  GK  G   A +  + + ++ F + +    +  VL+  +   ++  +N    ++ L+ 
Sbjct: 175 YFGGKRTGDLMARIGSETDRINVFLSLHALDFANDVLMIVMTAVILISINPLLAVVTLVP 234

Query: 173 APLVPLFMALVGIKAADASRKNFKALQRLSGHFYDRLQALTTIRLFDRTTAETEHMRGAS 232
            P +   + +V  +      K  +    ++    D +  +  ++ F +   E E  R A+
Sbjct: 235 LPFIAWMIHVVRDRLRTGFEKIDRVWSEVTNVLADTIPGIRVVKAFAQERREAERFRVAN 294

Query: 233 EVFRHRTMDVLRIAFLSSAVLEFFTSISIALTAVYFGFSYIGELNFGYYGASVTLFAGLF 292
                    + R   L +  +   T I + L    FG   +          S+T+     
Sbjct: 295 AYNLQVNDKLNRTWSLFTPTVSLLTEIGL-LVVWAFGIWQVAR-------GSITVGVLTA 346

Query: 293 VLILAPEFYQPLRDLGTYYHAKQLAVGAAESIVDFLQTEVDTLHSGERHLSDNDDIEIIA 352
            +     FY  L  +       Q A   A+ I D L            H+S+   +   A
Sbjct: 347 FIAYIGRFYTRLDSMSRIVSVTQKAAAGAKRIFDILD-----------HVSN---VPEPA 392

Query: 353 NDLVVLSPQGKRLAGPLSF-------------TLQSGKTTALVGPSGAGKTSLINTILGF 399
           N + V   QG+     L F              ++ G+   LVG SG+GK++L+N I  F
Sbjct: 393 NPVKVERVQGRIEMSGLGFRYGSRAVIHDLDLVIEPGEMIGLVGHSGSGKSTLVNLICRF 452

Query: 400 MPY-QGSLTINGIELRELDHAQWRQTISWVGQNPLLLYGTIRDNVTLGKHNIADEQVTQT 458
                G++ ++G ++R    A +R+ +  V Q P L +GTI  N+  GK +   E++   
Sbjct: 453 YDVTDGAIKVDGTDIRRFAVADYRRHVGLVLQEPFLFFGTIAQNIAYGKPDATREEIVAA 512

Query: 459 LQAAYAQEFVE--QQGLDYPISDRSAGLSVGQAQRLALARAILQNGRFWLLDEPTASLDA 516
            +AA+A +F+   Q G D  + +R  GLS G+ QR+++ARA+L + R  +LDE T+++D 
Sbjct: 513 ARAAHAHDFILRLQHGYDSLVGERGQGLSGGERQRISIARALLIDPRILILDEATSAVDT 572

Query: 517 RSEQYVMRGLTESIQQRTALFVTHQLQPLQSVEQILVMENGLLVQAGHFEDLSQQSGLFA 576
            +E+ + + L   +Q RT + + H+L  L+  ++++VM+ G +V+ G  + L  + G + 
Sbjct: 573 ETEKEIQKALDNLVQGRTTIAIAHRLSTLRKADRLVVMDRGEVVEVGPHDALMAKQGAYW 632

Query: 577 TMLAANQALQAANKGDLDA 595
            +  A        +GD DA
Sbjct: 633 RLYQAQ-----LRQGDDDA 646