Pairwise Alignments

Query, 595 a.a., thiol reductant ABC exporter subunit CydD from Vibrio cholerae E7946 ATCC 55056

Subject, 562 a.a., Efflux ABC transporter for glutathione/L-cysteine, essential for assembly of bd-type respiratory oxidases => CydD subunit from Variovorax sp. SCN45

 Score =  257 bits (656), Expect = 1e-72
 Identities = 178/540 (32%), Positives = 271/540 (50%), Gaps = 40/540 (7%)

Query: 11  LWLKQQSKLAKRWLAIAVGLGVLSSLFLVAQAALLASILHQLIIEQVDKHLLIPHFFGLA 70
           LWL Q + LA     +A G G L +++L A A LL  +L                     
Sbjct: 30  LWLPQAALLAMAVQGLASGQG-LQAVWLPAGATLLLGLL--------------------- 67

Query: 71  ALIAVRALC-SWGREIAGFRCGEEIRRYIRQLILDKLRDLGPAYIKGKPAGSWAALMLEQ 129
                RA C +WG      R   ++   +R    + L    P      P+G  A+++ EQ
Sbjct: 68  -----RAACEAWGARRTFGRARAQLTA-LRAQTAEALAGGSPLDRGRAPSGQAASVLAEQ 121

Query: 130 VENMHDFFARYLPQMSLSVLVPFVILAVVFPVNWAAGLIFLLTAPLVPLFMALVGIKAAD 189
            E +  +  RY P    + +VP  IL  V   +W A L+ L  APL+P+FMA+VG +A  
Sbjct: 122 AEALVPYLVRYQPARWRATVVPIFILCAVAYFSWVAALVLLFAAPLIPIFMAIVGWRAKA 181

Query: 190 ASRKNFKALQRLSGHFYDRLQALTTIRLFDRTTAETEHMRGASEVFRHRTMDVLRIAFLS 249
           AS      +  ++    DRL+ L T+R  D   A    +  A++  R RTM VLRIAFLS
Sbjct: 182 ASEAQMVEMGGMNAFLLDRLRGLATLRALDAVDATAHRLGDAAQSLRVRTMAVLRIAFLS 241

Query: 250 SAVLEFFTSISIALTAVYFGFSYIGELNFGYYGASVTLFAGLFVLILAPEFYQPLRDLGT 309
           SAVLE F+++ +A+ AVY GF  +G L FG +G  ++L  GLFVL+LAP F++PLR+L  
Sbjct: 242 SAVLELFSALGVAMVAVYVGFHLLGSLGFGTWGQPLSLGEGLFVLLLAPAFFEPLRELSA 301

Query: 310 YYHAKQLAVGAAESIVDFLQTEVDTLHSGERHLSDNDDIEIIANDLVVL-------SPQG 362
            +H +     A E++ D LQ     L      L        +A   + +         + 
Sbjct: 302 VWHDRAAGEAALEAL-DGLQRHALPLPGANASLKRAAAGSAVAAPAIAVHGLHFSWPGET 360

Query: 363 KRLAGPLSFTLQSGKTTALVGPSGAGKTSLINTILGFMP-YQGSLTINGIELRELDHAQW 421
           + +   L   + +G+  AL GPSG+GKT+L++ + G +P   G + I G+ L +   A  
Sbjct: 361 REVFDGLELRVSAGEHIALTGPSGSGKTALLSLLAGLVPATSGEIAIGGVALTDHTIASL 420

Query: 422 RQTISWVGQNPLLLYGTIRDNVTLGKHNIADEQVTQTLQAAYAQEFVEQQGLDYPISDRS 481
           RQ ++W+GQ P +  G++  NV LG+ ++   +VT+ ++ A A + V Q      + +  
Sbjct: 421 RQRMAWMGQAPHVFAGSVEANVALGRTDVDTPRVTEAMRFA-ALDAVAQAHPGTALGEGG 479

Query: 482 AGLSVGQAQRLALAR-AILQNGRFWLLDEPTASLDARSEQYVMRGLTESIQQRTALFVTH 540
            GLS G+A RLALAR A+  +    L+DEPTA LD+ +   V   L E  + +T +  TH
Sbjct: 480 RGLSGGEAVRLALARIAVHPHADLLLVDEPTAHLDSETAARVGDALVELARGKTLIVATH 539