Pairwise Alignments

Query, 595 a.a., thiol reductant ABC exporter subunit CydD from Vibrio cholerae E7946 ATCC 55056

Subject, 610 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  164 bits (414), Expect = 1e-44
 Identities = 128/497 (25%), Positives = 243/497 (48%), Gaps = 25/497 (5%)

Query: 98  IRQLILDKLRDLGPAYIKGKPAGSWAALMLEQVENMHDFFARYLPQMSLSVLVPFVILAV 157
           +R+ +++KL  +     + + +G   A ++  +E +  F    L +  +S+L       V
Sbjct: 127 MRRKMIEKLGRISIRQYETRGSGGINAHLITDIETIDQFIGSTLSKFLISLLTVIGTAIV 186

Query: 158 VFPVNWAAGLIFLLTAPLVPLFMALVGIKAADASRKNFKALQRLSGHFYDRLQALTTIR- 216
           +  + W  GL  LL  P+V  F  ++G +     ++  +A +R      + L  +  +R 
Sbjct: 187 LLWLEWRLGLFILLVNPIVIYFSRMLGSQVKHLKKRENQAFERFQNRLVETLDGIYQLRA 246

Query: 217 ------LFDRTTAETEHMRGASEVFRHRTMDVLRIAFLSSAVLEFFTSISIALTAVYFGF 270
                   +R  ++ + +R  ++ +  ++    R++FL   +L F    ++A+  V F  
Sbjct: 247 ANKEREFLNRLISDADAVRENADKYAWQSEAAGRLSFLLF-LLGFELFRAVAMLMVVFSD 305

Query: 271 SYIGELNFGYYGASVTLFAGLFVLILAPEFYQPLRDLGTYYHAKQLAVGAAESIVDFLQT 330
             IG++ F  +G            +L+P   Q L  +   ++A + A+    S+++ L+ 
Sbjct: 306 LTIGQI-FAVFG--------YLWFMLSP--VQELLGIQFSWYAAKAALKRINSLLE-LEE 353

Query: 331 EVDTLHSGERHLSDNDDIEIIANDLVVLSPQGKRLAGPLSFTLQSGKTTALVGPSGAGKT 390
           E   + S     +   +++I  N++        ++   LS  + +GK  ALVG SG GK+
Sbjct: 354 EYRPI-SKVNPFTQLGEVDIEINNIHFSYDGESQVLNDLSLHIPAGKKVALVGASGGGKS 412

Query: 391 SLINTILG-FMPYQGSLTINGIELRELDHAQWRQTISWVGQNPLLLYGTIRDNVTLGKHN 449
           +LI  ++G +    G++  NG    ++     R  I+ V Q P+L   T+R N+TLG   
Sbjct: 413 TLIQLLIGVYRAQSGAIRFNGQHCDDISFDVIRDQIAVVLQQPILFNDTLRHNLTLGGQ- 471

Query: 450 IADEQVTQTLQAAYAQEFVEQ--QGLDYPISDRSAGLSVGQAQRLALARAILQNGRFWLL 507
            +D+ + Q L  A  Q+ + +  QGL+  I      LS GQ QRLA+AR +L N +F +L
Sbjct: 472 FSDDVLWQALDIAQLQDVITKLDQGLESQIGRNGIRLSGGQRQRLAIARMVLSNPKFVIL 531

Query: 508 DEPTASLDARSEQYVMRGLTESIQQRTALFVTHQLQPLQSVEQILVMENGLLVQAGHFED 567
           DE T++LD  +E  +   L++ +  RT L V H+L  ++  + I V+E+G + Q+G   +
Sbjct: 532 DEATSALDTATEAALHLALSKFLHGRTTLIVAHRLSAVKQADLIYVLEDGHVSQSGTHHE 591

Query: 568 LSQQSGLFATMLAANQA 584
           L +Q GL+ T+  + Q+
Sbjct: 592 LLEQEGLYQTLYGSVQS 608