Pairwise Alignments

Query, 595 a.a., thiol reductant ABC exporter subunit CydD from Vibrio cholerae E7946 ATCC 55056

Subject, 504 a.a., Efflux ABC transporter for glutathione/L-cysteine, essential for assembly of bd-type respiratory oxidases => CydD subunit from Sphingobium sp. HT1-2

 Score =  213 bits (542), Expect = 2e-59
 Identities = 163/474 (34%), Positives = 226/474 (47%), Gaps = 35/474 (7%)

Query: 75  VRALCSWGREIAGFRCGEEIRRYIRQLILDKLRDLGPAYIKGKPAGSWAALMLEQVENMH 134
           VRA       +   R  + I    R  +L +L  LG    +   AG  A L ++ +  + 
Sbjct: 44  VRAAGLMLAHVQAIRSAQRIVAARRSTLLPRL--LGGRLARPLLAGENATLAIDHLAAIE 101

Query: 135 DFFARYLPQMSLSVLVPFVILAVVFPVNWAAGLIFLLTAPLVPLFMALVGIKAADASRKN 194
              AR+LP    + L P ++ A+V   +W    I L T       M L G  A  A+ + 
Sbjct: 102 AHGARFLPIRKAAALGPLLVAAIVATASWVCAAIMLATLLPFAFGMVLAGTAARAAAERQ 161

Query: 195 FKALQRLSGHFYDRLQALTTIRLFDRTTAETEHMRGASEVFRHRTMDVLRIAFLSSAVLE 254
             AL  LSG F DRL+AL  IR        +  + GA++    RT  VLR+AFLS AVLE
Sbjct: 162 LAALAELSGLFVDRLRALPLIRHHGAQARISRQVAGAAQEVATRTGAVLRVAFLSGAVLE 221

Query: 255 FFTSISIALTAVYFGFSYIGELNFGYYGASVTLFAGLFVLILAPEFYQPLRDLGTYYHAK 314
           FF ++S+AL AVY GF+ +G L F    A + L A LF L LAPEFY P+R L   YH K
Sbjct: 222 FFAALSVALVAVYCGFALLGLLPFPAPEA-LDLRAALFALALAPEFYLPMRRLAAAYHDK 280

Query: 315 QLAVGAAESIVDFLQTEVDTLHSGE-----RHLSDNDDIEIIANDLVVLSPQGKRLAGPL 369
           Q+   A ++I   L       H         HL D            +    G  + GP+
Sbjct: 281 QMGEAADKAIAAALPEAEAAPHPASPLFEGLHLKD------------LRIGMGSEI-GPV 327

Query: 370 SFTLQSGKTTALVGPSGAGKTSLINTILGFM-PYQGSLTINGIELRELDHAQWRQTISWV 428
           S TL+     AL GP+G+GKTS++  I G + P  G L++       +D A+    I+W 
Sbjct: 328 SLTLKPHDLIALTGPTGSGKTSMLAAIAGQIDPASGELSL-------VDPAR----IAWA 376

Query: 429 GQNPLLLYGTIRDNVTLGKHNIADEQVTQTLQAAYAQEFV--EQQGLDYPISDRSAGLSV 486
            Q PLLL G++ DN+ L + +    ++ Q          +    +GLD  I  + AGLS 
Sbjct: 377 AQRPLLLPGSLADNIALARPDADRAEIAQVAARVGLTPMLAARPEGLDLAIDHQGAGLSG 436

Query: 487 GQAQRLALARAILQNGRFWLLDEPTASLDARSEQYVMRGLTESIQQRTALFVTH 540
           G+ +R+ LARAIL      L DEPTA LDA S   ++  L     +R  L  TH
Sbjct: 437 GERRRIGLARAILSERPVLLCDEPTADLDAESATDIIALLVALSTERAILVATH 490