Pairwise Alignments

Query, 595 a.a., thiol reductant ABC exporter subunit CydD from Vibrio cholerae E7946 ATCC 55056

Subject, 582 a.a., lipid A ABC transporter ATP-binding protein/permease MsbA from Pantoea agglomerans CFBP13505 P0401

 Score =  152 bits (383), Expect = 5e-41
 Identities = 107/431 (24%), Positives = 211/431 (48%), Gaps = 17/431 (3%)

Query: 154 ILAVVFPVNWAAGLIFLLTAPLVPLFMALVGIKAADASRKNFKALQRLSGHFYDRLQALT 213
           +  ++F  +W   LI ++ AP+V   +  V  +    S+     + +++      L+   
Sbjct: 156 LFIMMFYYSWQLSLILIVLAPIVSFAIRTVSKRFRTISKSMQNTMGQVTTSAEQMLKGHK 215

Query: 214 TIRLFDRTTAETEHMRGASEVFRHRTMDVLRIAFLSSAVLEFFTSISIALTAVYFGFSYI 273
            + +F     E+E     S   R + M ++  + +S  +++   S+++A   V +  S+ 
Sbjct: 216 EVLIFGGQDIESERFSRVSNRMRQQGMKLVSASSISDPIIQLIASLALAF--VLYAASFP 273

Query: 274 GELNFGYYGASVTLFAGLFVLILAPEFYQPLRDLGTYYHAKQLAVGAAESIVDFLQTEVD 333
             ++    G    +F+ +  L+      +PL+ L       Q  + A +++   L +E +
Sbjct: 274 SVMDTLTAGTITVVFSSMIALM------RPLKSLTNVNAQFQRGMAACQTLFSILDSEQE 327

Query: 334 TLHSGERHLSDNDDIEIIANDLVVLSPQGKRLAG--PLSFTLQSGKTTALVGPSGAGKTS 391
             +          DIE    D+    P G+ +     ++ +L +GKT ALVG SG+GK++
Sbjct: 328 VDNGTREITRAKGDIEF--RDVTFTYP-GREIPALRNINLSLPAGKTVALVGRSGSGKST 384

Query: 392 LINTILGFMPYQ-GSLTINGIELRELDHAQWRQTISWVGQNPLLLYGTIRDNVTLGK-HN 449
           + + +  F   Q G + ++G +LRE      R  ++ V QN  L   TI +N+   +   
Sbjct: 385 MASLLTRFYDIQQGEILLDGHDLREYSLRSLRNQVALVSQNVHLFNDTIANNIAYARSEQ 444

Query: 450 IADEQVTQTLQAAYAQEFVEQ--QGLDYPISDRSAGLSVGQAQRLALARAILQNGRFWLL 507
            + E++      A+A +F+ +  +GLD  I +    LS GQ QR+A+ARA+L++    +L
Sbjct: 445 YSREEIEHAATMAHAMDFINKMDKGLDTMIGENGVLLSGGQRQRIAIARALLRDCPILIL 504

Query: 508 DEPTASLDARSEQYVMRGLTESIQQRTALFVTHQLQPLQSVEQILVMENGLLVQAGHFED 567
           DE T++LD  SE+ +   L E  + RT+L + H+L  ++  ++I+V+E+G +V+ G  + 
Sbjct: 505 DEATSALDTESERAIQSALDELQKNRTSLVIAHRLSTIEKADEIVVIEDGQIVERGTHQV 564

Query: 568 LSQQSGLFATM 578
           L  + G +A +
Sbjct: 565 LLAERGAYAQL 575