Pairwise Alignments

Query, 595 a.a., thiol reductant ABC exporter subunit CydD from Vibrio cholerae E7946 ATCC 55056

Subject, 588 a.a., Transport ATP-binding protein CydD from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  627 bits (1618), Expect = 0.0
 Identities = 318/585 (54%), Positives = 432/585 (73%), Gaps = 2/585 (0%)

Query: 1   MDKKKQRSLNLWLKQQSKLAKRWLAIAVGLGVLSSLFLVAQAALLASILHQLIIEQVDKH 60
           M+K +Q+ L  WLKQQS +++RWL I+  LG +S + +VAQA ++A IL  +I+E + + 
Sbjct: 1   MNKTRQKELTRWLKQQSVISQRWLNISRLLGFMSGVLIVAQAWIMARILQHMIMENIPRE 60

Query: 61  LLIPHFFGLAALIAVRALCSWGREIAGFRCGEEIRRYIRQLILDKLRDLGPAYIKGKPAG 120
            L+  F  L  +  +RA   W RE  GF  G+ IR  IR+ +LD+L+  GPA+I+GKPAG
Sbjct: 61  ALLLPFILLILVFVLRAWVVWLRERVGFHAGQHIRFEIRRQVLDRLQQAGPAWIQGKPAG 120

Query: 121 SWAALMLEQVENMHDFFARYLPQMSLSVLVPFVILAVVFPVNWAAGLIFLLTAPLVPLFM 180
           SWA L+LEQ+++MHD++ARYLPQM+L+V VP +I+A +FP NWAA LI L TAPL+PLFM
Sbjct: 121 SWATLVLEQIDDMHDYYARYLPQMALAVCVPLLIVAAIFPSNWAAALILLGTAPLIPLFM 180

Query: 181 ALVGIKAADASRKNFKALQRLSGHFYDRLQALTTIRLFDRTTAETEHMRGASEVFRHRTM 240
           A+VG+ AADA+R+NF AL RLSGHF DRL+ + T+R+F R  AETE +R AS+ FR RTM
Sbjct: 181 AMVGMGAADANRRNFLALARLSGHFLDRLRGMETLRIFGRGEAETESIRAASQDFRQRTM 240

Query: 241 DVLRIAFLSSAVLEFFTSISIALTAVYFGFSYIGELNFGYYGASVTLFAGLFVLILAPEF 300
           +VLR+AFLSS VLEFFTS+SIAL AVYFGFSY+GELNFG+YG  VTL AG   LILAPEF
Sbjct: 241 EVLRLAFLSSGVLEFFTSLSIALVAVYFGFSYLGELNFGHYGTGVTLAAGFLALILAPEF 300

Query: 301 YQPLRDLGTYYHAKQLAVGAAESIVDFLQTEVDTLHSGERHLSDNDDIEIIANDLVVLSP 360
           +QPLRDLGT+YHAK  AVGAA+S+  FL+T +     GE  L++N+ + I A +L++ SP
Sbjct: 301 FQPLRDLGTFYHAKAQAVGAADSLKTFLETPLAHPARGEVELAENEPVTIDAVNLIITSP 360

Query: 361 QGKRLAGPLSFTLQSGKTTALVGPSGAGKTSLINTILGFMPYQGSLTINGIELRELDHAQ 420
           +GK LAGPL+F+L +G+   LVG SG+GK+SL+N + GF+ YQGSL ING+ELR+L    
Sbjct: 361 EGKTLAGPLNFSLAAGERAVLVGRSGSGKSSLLNVLSGFLSYQGSLRINGVELRDLSPES 420

Query: 421 WRQTISWVGQNPLLLYGTIRDNVTLGKHNIADEQVTQTLQAAYAQEFVE--QQGLDYPIS 478
           WRQ +SWVGQNP L   T+R+NV L + + +++++   L AA+  EF+    QG+D P+ 
Sbjct: 421 WRQHLSWVGQNPQLPAATLRENVLLARPDASEQELYAALDAAWVSEFLPLLPQGVDTPLG 480

Query: 479 DRSAGLSVGQAQRLALARAILQNGRFWLLDEPTASLDARSEQYVMRGLTESIQQRTALFV 538
           + ++ LSVGQAQR+A+ARA+L   +  LLDEP ASLDA SEQ VM+ L  + +++T L V
Sbjct: 481 NHASRLSVGQAQRVAVARALLNPCQLLLLDEPAASLDAHSEQRVMQALKAASKRQTTLMV 540

Query: 539 THQLQPLQSVEQILVMENGLLVQAGHFEDLSQQSGLFATMLAANQ 583
           THQL+ L   + I VM++G +V+ G + +LS  +G FAT+LA  Q
Sbjct: 541 THQLEDLADWDAIWVMQDGAIVEQGSYAELSAANGAFATLLAHRQ 585