Pairwise Alignments

Query, 595 a.a., thiol reductant ABC exporter subunit CydD from Vibrio cholerae E7946 ATCC 55056

Subject, 593 a.a., putative multidrug transporter membrane ATP-binding components from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  153 bits (386), Expect = 2e-41
 Identities = 134/556 (24%), Positives = 253/556 (45%), Gaps = 29/556 (5%)

Query: 36  LFLVAQAALLASILHQLIIEQV--DKHLLIPHFFGLAA----LIAVRALCSWGREIAGFR 89
           L++ A A +   +L    I+ +    HL +    GLAA    L  + A   + + +   R
Sbjct: 32  LWIAAAAEVSGPLLISYFIDNMVARHHLPLGKVAGLAAAYVGLQFLAAGLHYAQSLLFNR 91

Query: 90  CGEEIRRYIRQLILDKLRDLGPAYIKGKPAGSWAALMLEQVENMHDFFARYLPQMSLSVL 149
               + + +R  ++D       +    +P G   + +    E + D +   +  +  S  
Sbjct: 92  AAVGVVQSLRTDVMDAALRQPLSAFDTQPVGQLISRVTNDTEVIRDLYVTVVATVLRSAA 151

Query: 150 VPFVILAVVFPVNWAAGLIFLLTAPLVPLFMALVGIKAADASRKNFKALQRLSGHFYDRL 209
           +   +L  +F ++W   L+ +L  P V   M +    +    R+    L  ++  F + +
Sbjct: 152 LIGAMLVAMFSLDWRMALVAILIFPAVLTVMIIYQRYSTPIVRRVRAYLADINDGFNEII 211

Query: 210 QALTTIRLFDRTTAETEHMRGASEVFRHRTMDVLRI-AFLSSAVLEFFTSISIALTAVYF 268
             ++ I+ F +     E M  AS       M  LR+  FL   +L  F+++ +    + F
Sbjct: 212 NGMSVIQQFRQQARFGERMGEASRSHYMARMQTLRLDGFLLRPLLSLFSALILCGLLMLF 271

Query: 269 GFSYIGELNFGYYGASVTLFAGLFVLILAPEFYQPLRDLGTYYHAKQLAVGAAESIVDFL 328
            F+  G +  G   A ++  + L          +PL +L T     Q AV A E + + +
Sbjct: 272 SFTSAGTIEVGVLYAFISYLSRL---------NEPLIELTTQQSMLQQAVVAGERVFELM 322

Query: 329 QTEVDTLHSGERHLSDNDDIEIIANDLVVLS---PQGKRLAGPLSFTLQSGKTTALVGPS 385
                     +R+ SD+  ++  A D+  LS        +   ++ ++ S    ALVG +
Sbjct: 323 D------RPRQRYGSDDRPLQSGAIDIDHLSFAYRDDNLVLQDITLSVPSRSFVALVGHT 376

Query: 386 GAGKTSLINTILGFMPY-QGSLTINGIELRELDHAQWRQTISWVGQNPLLLYGTIRDNVT 444
           G+GK++L + ++G+ P  QG + ++G E+  L+H   RQ ++ V Q+P+++  T   NVT
Sbjct: 377 GSGKSTLASLLMGYYPLTQGEIRLDGREIASLNHRVLRQGVAMVQQDPVVMADTFLANVT 436

Query: 445 LGKHNIADEQVTQTLQAAYAQEFVE--QQGLDYPISDRSAGLSVGQAQRLALARAILQNG 502
           LG+ ++++ QV Q L+     +       GL   + ++   LSVGQ Q LALAR ++   
Sbjct: 437 LGR-DVSEAQVWQALETVQLADLARGLSDGLHTHLGEQGNTLSVGQKQLLALARVLVDAP 495

Query: 503 RFWLLDEPTASLDARSEQYVMRGLTESIQQRTALFVTHQLQPLQSVEQILVMENGLLVQA 562
           +  +LDE TAS+D+ +EQ + + L    ++ T + + H+L  +   + ILV+  G  V+ 
Sbjct: 496 QILILDEATASIDSGTEQAIQQALAAIRERTTLVVIAHRLSTIVEADTILVLHRGQAVER 555

Query: 563 GHFEDLSQQSGLFATM 578
           G  + L    G +  M
Sbjct: 556 GTHQQLLAAQGRYWQM 571