Pairwise Alignments

Query, 595 a.a., thiol reductant ABC exporter subunit CydD from Vibrio cholerae E7946 ATCC 55056

Subject, 582 a.a., Lipid A export ATP-binding/permease protein MsbA (EC 3.6.3.25) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  155 bits (391), Expect = 6e-42
 Identities = 109/432 (25%), Positives = 218/432 (50%), Gaps = 19/432 (4%)

Query: 154 ILAVVFPVNWAAGLIFLLTAPLVPLFMALVGIKAADASRKNFKALQRLSGHFYDRLQALT 213
           +  ++F  +W   +I ++ AP+V + + +V  +    S+     + +++      L+   
Sbjct: 156 LFIMMFYYSWQLSIILVVLAPIVSIAIRVVSKRFRSISKNMQNTMGQVTTSAEQMLKGHK 215

Query: 214 TIRLFDRTTAETEHMRGASEVFRHRTMDVLRIAFLSSAVLEFFTSISIALTAVYFGFSYI 273
            + +F     ET+     S   R + M ++  + +S  +++   S+++A   V +  S+ 
Sbjct: 216 EVLIFGGQEVETKRFDKVSNKMRLQGMKMVSASSISDPIIQLIASLALAF--VLYAASFP 273

Query: 274 GELNFGYYGASVTLFAGLFVLILAPEFYQPLRDLGTYYHAKQLAVGAAESIVDFLQTEVD 333
             ++    G    +F+ +  L+      +PL+ L       Q  + A +++   L +E +
Sbjct: 274 SVMDSLTAGTITVVFSSMIALM------RPLKSLTNVNAQFQRGMAACQTLFAILDSEQE 327

Query: 334 TLHSGERHLSD-NDDIEIIANDLVVLSPQGKRLAGPLSFTLQ--SGKTTALVGPSGAGKT 390
               G+R +     D+E      V  +  G+ +    +  L+  +GKT ALVG SG+GK+
Sbjct: 328 K-DEGKRVIDRATGDLEFRN---VTFTYPGREVPALRNINLKIPAGKTVALVGRSGSGKS 383

Query: 391 SLINTILGFMPY-QGSLTINGIELRELDHAQWRQTISWVGQNPLLLYGTIRDNVTLGK-H 448
           ++ + I  F    +G + ++G +LRE   A  R  ++ V QN  L   T+ +N+   +  
Sbjct: 384 TIASLITRFYDIDEGHILMDGHDLREYTLASLRNQVALVSQNVHLFNDTVANNIAYARTE 443

Query: 449 NIADEQVTQTLQAAYAQEFVEQQ--GLDYPISDRSAGLSVGQAQRLALARAILQNGRFWL 506
             + EQ+ +  + AYA +F+ +   GLD  I +    LS GQ QR+A+ARA+L++    +
Sbjct: 444 EYSREQIEEAARMAYAMDFINKMDNGLDTIIGENGVLLSGGQRQRIAIARALLRDSPILI 503

Query: 507 LDEPTASLDARSEQYVMRGLTESIQQRTALFVTHQLQPLQSVEQILVMENGLLVQAGHFE 566
           LDE T++LD  SE+ +   L E  + RT+L + H+L  ++  ++I+V+E+G++V+ G   
Sbjct: 504 LDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEQADEIVVVEDGIIVERGTHS 563

Query: 567 DLSQQSGLFATM 578
           +L  Q G++A +
Sbjct: 564 ELLAQHGVYAQL 575