Pairwise Alignments

Query, 595 a.a., thiol reductant ABC exporter subunit CydD from Vibrio cholerae E7946 ATCC 55056

Subject, 593 a.a., fused predicted multidrug transporter subunits of ABC superfamily: ATP-binding components (NCBI) from Escherichia coli BW25113

 Score =  160 bits (404), Expect = 2e-43
 Identities = 124/471 (26%), Positives = 220/471 (46%), Gaps = 27/471 (5%)

Query: 117 KPAGSWAALMLEQVENMHDFFARYLPQMSLSVLVPFVILAVVFPVNWAAGLIFLLTAPLV 176
           +P G   + +    E + D +   +  +  S  +   +L  +F ++W   L+ ++  P+V
Sbjct: 119 QPVGQVISRVTNDTEVIRDLYVTVVATVLRSAALVGAMLVAMFSLDWRMALVAIMIFPVV 178

Query: 177 PLFMALVGIKAADASRKNFKALQRLSGHFYDRLQALTTIRLFDRTTAETEHMRGASEVFR 236
            + M +    +    R+    L  ++  F + +  ++ I+ F +     E M  AS    
Sbjct: 179 LVVMVIYQRYSTPIVRRVRAYLADINDGFNEIINGMSVIQQFRQQARFGERMGEASRSHY 238

Query: 237 HRTMDVLRI-AFLSSAVLEFFTSISIALTAVYFGFSYIGELNFGYYGASVTLFAGLFVLI 295
              M  LR+  FL   +L  F+S+ +    + FGFS  G +  G   A ++    L    
Sbjct: 239 MARMQTLRLDGFLLRPLLSLFSSLILCGLLMLFGFSASGTIEVGVLYAFISYLGRL---- 294

Query: 296 LAPEFYQPLRDLGTYYHAKQLAVGAAESIVDFLQTEVDTLHSGERHLSDNDDIEI----I 351
                 +PL +L T     Q AV A E + + +         G R    NDD  +    I
Sbjct: 295 -----NEPLIELTTQQAMLQQAVVAGERVFELMD--------GPRQQYGNDDRPLQSGTI 341

Query: 352 ANDLVVLSPQGKRLA-GPLSFTLQSGKTTALVGPSGAGKTSLINTILGFMPY-QGSLTIN 409
             D V  + +   L    ++ ++ S    ALVG +G+GK++L + ++G+ P  +G + ++
Sbjct: 342 EVDNVSFAYRDDNLVLKNINLSVPSRNFVALVGHTGSGKSTLASLLMGYYPLTEGEIRLD 401

Query: 410 GIELRELDHAQWRQTISWVGQNPLLLYGTIRDNVTLGKHNIADEQVTQTLQAAYAQEFVE 469
           G  L  L H+  RQ ++ V Q+P++L  T   NVTLG+ +I++E+V Q L+     E   
Sbjct: 402 GRPLSSLSHSALRQGVAMVQQDPVVLADTFLANVTLGR-DISEERVWQALETVQLAELAR 460

Query: 470 QQ--GLDYPISDRSAGLSVGQAQRLALARAILQNGRFWLLDEPTASLDARSEQYVMRGLT 527
               G+  P+ ++   LSVGQ Q LALAR +++  +  +LDE TAS+D+ +EQ +   L 
Sbjct: 461 SMSDGIYTPLGEQGNNLSVGQKQLLALARVLVETPQILILDEATASIDSGTEQAIQHALA 520

Query: 528 ESIQQRTALFVTHQLQPLQSVEQILVMENGLLVQAGHFEDLSQQSGLFATM 578
              +  T + + H+L  +   + ILV+  G  V+ G  + L    G +  M
Sbjct: 521 AVREHTTLVVIAHRLSTIVDADTILVLHRGQAVEQGTHQQLLAAQGRYWQM 571