Pairwise Alignments

Query, 595 a.a., thiol reductant ABC exporter subunit CydD from Vibrio cholerae E7946 ATCC 55056

Subject, 593 a.a., ABC-type multidrug transport system, ATPase and permease components from Enterobacter asburiae PDN3

 Score =  150 bits (379), Expect = 1e-40
 Identities = 119/467 (25%), Positives = 212/467 (45%), Gaps = 19/467 (4%)

Query: 117 KPAGSWAALMLEQVENMHDFFARYLPQMSLSVLVPFVILAVVFPVNWAAGLIFLLTAPLV 176
           +P G   + +    E + D +   +  +  S  +   +L  +F ++W   L+ +   P V
Sbjct: 119 QPVGQVISRVTNDTEVIRDLYVTVVATVLRSAALIGAMLVAMFSLDWRMALVAITIFPAV 178

Query: 177 PLFMALVGIKAADASRKNFKALQRLSGHFYDRLQALTTIRLFDRTTAETEHMRGASEVFR 236
            + M +    +    R+    L  ++  F + +  ++ I+ F +     E M  AS    
Sbjct: 179 LIVMVIYQRYSTPIVRRVRAYLADINDGFNEVINGMSVIQQFRQQARFGERMGEASRSHY 238

Query: 237 HRTMDVLRI-AFLSSAVLEFFTSISIALTAVYFGFSYIGELNFGYYGASVTLFAGLFVLI 295
              M  LR+  FL   +L  F+++ +    + FG S  G +  G   A ++    L    
Sbjct: 239 MARMQTLRLDGFLLRPLLSLFSALVLCGLLMLFGLSSNGTIEVGVLYAFISYLGRL---- 294

Query: 296 LAPEFYQPLRDLGTYYHAKQLAVGAAESIVDFLQTEVDTLHSGERHLSDNDDIEIIANDL 355
                 +PL +L T     Q AV A E + + +        + ER L        IA D 
Sbjct: 295 -----NEPLIELTTQQSMLQQAVVAGERVFELMDRPRQAYGNDERPLQSGT----IAFDN 345

Query: 356 VVLSPQGKRLA-GPLSFTLQSGKTTALVGPSGAGKTSLINTILGFMPY-QGSLTINGIEL 413
           V  + +  RL    ++  + S    ALVG +G+GK++L + ++G+ P   G + ++G  L
Sbjct: 346 VSFAYREDRLVLQDITLDVPSRGFVALVGHTGSGKSTLASLLMGYYPVTHGEIRLDGRPL 405

Query: 414 RELDHAQWRQTISWVGQNPLLLYGTIRDNVTLGKHNIADEQVTQTLQAAYAQEFVE--QQ 471
             L H   R+ ++ V Q+P++L  T   NVTLG+ + + EQV   L+     E       
Sbjct: 406 ASLSHTVLRKGVAMVQQDPVVLADTFYANVTLGR-DYSQEQVWDVLEKVQLAELARGFSD 464

Query: 472 GLDYPISDRSAGLSVGQAQRLALARAILQNGRFWLLDEPTASLDARSEQYVMRGLTESIQ 531
           G++  + ++   LSVGQ Q LALAR +++  +  +LDE TAS+D+ +EQ + + L     
Sbjct: 465 GINTKLGEQGNNLSVGQKQLLALARVLIETPQILILDEATASIDSGTEQAIQQALAAVRD 524

Query: 532 QRTALFVTHQLQPLQSVEQILVMENGLLVQAGHFEDLSQQSGLFATM 578
             T + + H+L  +   + ILV+  G  V+ G   +L +  G +  M
Sbjct: 525 HTTLVVIAHRLSTIVEADTILVLHRGQAVERGTHRELLEAKGRYWQM 571