Pairwise Alignments

Query, 595 a.a., thiol reductant ABC exporter subunit CydD from Vibrio cholerae E7946 ATCC 55056

Subject, 583 a.a., lipid A export permease/ATP-binding protein MsbA from Enterobacter asburiae PDN3

 Score =  158 bits (400), Expect = 5e-43
 Identities = 108/432 (25%), Positives = 220/432 (50%), Gaps = 19/432 (4%)

Query: 154 ILAVVFPVNWAAGLIFLLTAPLVPLFMALVGIKAADASRKNFKALQRLSGHFYDRLQALT 213
           + A++F  +W   +I ++ AP+V + + +V  +  + S+     + +++      L+   
Sbjct: 156 LFAMMFYYSWQLSIILIVLAPIVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHK 215

Query: 214 TIRLFDRTTAETEHMRGASEVFRHRTMDVLRIAFLSSAVLEFFTSISIALTAVYFGFSYI 273
            + +F     ET+     S   R + M ++  + +S  +++   S+++A   V +  S+ 
Sbjct: 216 EVLIFGGQDVETKRFDKVSNKMRLQGMKMVSASSISDPIIQLIASLALAF--VLYAASFP 273

Query: 274 GELNFGYYGASVTLFAGLFVLILAPEFYQPLRDLGTYYHAKQLAVGAAESIVDFLQTEVD 333
             +     G    +F+ +  L+      +PL+ L       Q  + A +++   L +E +
Sbjct: 274 SVMETLTAGTITVVFSSMIALM------RPLKSLTNVNAQFQRGMAACQTLFSILDSEQE 327

Query: 334 TLHSGERHLSD-NDDIEIIANDLVVLSPQGKRLAG--PLSFTLQSGKTTALVGPSGAGKT 390
               G+R +   N D+E      V  +  G+ +     ++ ++ +GKT ALVG SG+GK+
Sbjct: 328 K-DEGKRVIERANGDVEFRN---VTFTYPGREVPALRNINLSIPAGKTVALVGRSGSGKS 383

Query: 391 SLINTILGFMPY-QGSLTINGIELRELDHAQWRQTISWVGQNPLLLYGTIRDNVTLGKHN 449
           ++ + +  F    +G + ++G +LRE      R  ++ V QN  L   T+ +N+   + +
Sbjct: 384 TIASLMTRFYDINEGEILLDGHDLREYTLQSLRNQVALVSQNVHLFNDTVANNIAYARTD 443

Query: 450 -IADEQVTQTLQAAYAQEFVEQQ--GLDYPISDRSAGLSVGQAQRLALARAILQNGRFWL 506
             + EQ+    + AYA +F+ +   GLD  I +    LS GQ QR+A+ARA+L++    +
Sbjct: 444 EYSREQIENAARMAYAMDFINKMDNGLDTIIGENGVLLSGGQRQRIAIARALLRDSPILI 503

Query: 507 LDEPTASLDARSEQYVMRGLTESIQQRTALFVTHQLQPLQSVEQILVMENGLLVQAGHFE 566
           LDE T++LD  SE+ +   L E  + RT+L + H+L  ++  ++I+V+E+G++V+ G   
Sbjct: 504 LDEATSALDTESERAIQSALDELQKNRTSLVIAHRLSTIEQADEIVVVEDGVIVERGSHA 563

Query: 567 DLSQQSGLFATM 578
           DL +  G++A +
Sbjct: 564 DLLEHRGVYAQL 575