Pairwise Alignments

Query, 595 a.a., thiol reductant ABC exporter subunit CydD from Vibrio cholerae E7946 ATCC 55056

Subject, 592 a.a., ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  163 bits (413), Expect = 2e-44
 Identities = 127/469 (27%), Positives = 223/469 (47%), Gaps = 31/469 (6%)

Query: 120 GSWAALMLEQVENMHDFFARYLPQMSLSVLVPFVILAVVFPVNWAAGLIFLLTAPLVPLF 179
           G   + ++  VE + +     L QM   VL   + L ++  ++    L  L+      + 
Sbjct: 132 GELVSRIMTDVEGVRNLVGTGLAQMVGGVLTSVICLGLLIYISPMMTLYVLVPV----II 187

Query: 180 MALVGIKAADASRKNFKALQRLSGHFYDRL-QALTTIRLFDRTTAETEHMR----GASEV 234
             L+ +KA    R  F+   +++     RL + L  IR+     AE + ++    G   +
Sbjct: 188 FGLISLKAFGKIRPIFRERGKINAEVTGRLAETLGGIRVIKGFNAEAQEVKTFEEGVLRL 247

Query: 235 FRHRTMDVLRIAFLSSAVLEFFTSISIALTAVYFGFSYIGELNFGYYGASVTLFAGLFVL 294
           + +    +   + ++SA        S  +  +       GEL FG + A  TL+ G  + 
Sbjct: 248 YLNIKSSLTTTSMVTSAATLLLGLASAGIMGIGGYMIMSGELTFGDFLA-FTLYLGFMIA 306

Query: 295 ILAPEFYQPLRDLGTYYHAKQLAVGAAESIVDFLQTEVDTLHSGERHLSDNDDIEIIAND 354
            +       + ++G+        +   E I++        L   E+  S N  +  I  D
Sbjct: 307 PIVQ-----MSNIGSQLTEAFAGLDRTEEIMNI------PLEEDEK--SRNLQLPSIKGD 353

Query: 355 LVVLS-----PQGKRLAGPLSFTLQSGKTTALVGPSGAGKTSLINTILGFM-PYQGSLTI 408
           L          +GK +   +SF   +G  TALVG SG+GKT++   +  F+ P  G++TI
Sbjct: 354 LAFEQVSFAYEEGKNVVKEVSFEAPAGSMTALVGTSGSGKTTIAGLVASFLNPAGGTVTI 413

Query: 409 NGIELRELDHAQWRQTISWVGQNPLLLYGTIRDNVTLGKHNIADEQVTQTLQAAYAQEFV 468
           +G +L+++  A +R  +  V Q+  L  GTIR N+   + +   EQ+ Q + AA+  EF 
Sbjct: 414 DGTDLQQVSLASYRSQLGVVLQDDFLFEGTIRQNILFPRPDARTEQLMQAVYAAHVHEFT 473

Query: 469 E--QQGLDYPISDRSAGLSVGQAQRLALARAILQNGRFWLLDEPTASLDARSEQYVMRGL 526
           +  + GLD  I +R   LS GQ QR+A+ARAIL + R  +LDE T++LD  SE  +   L
Sbjct: 474 DRFEDGLDTLIGERGVKLSGGQKQRIAIARAILADPRILILDEATSNLDTESETLIQESL 533

Query: 527 TESIQQRTALFVTHQLQPLQSVEQILVMENGLLVQAGHFEDLSQQSGLF 575
            + ++ RT+  + H+L  ++  +QILV+E G +V+ G  E+L ++ G +
Sbjct: 534 KKLMKGRTSFVIAHRLSTIRQADQILVVEKGEIVERGQHEELMEKRGRY 582