Pairwise Alignments

Query, 595 a.a., thiol reductant ABC exporter subunit CydD from Vibrio cholerae E7946 ATCC 55056

Subject, 608 a.a., ABC-type multidrug transport system, ATPase and permease components from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  151 bits (381), Expect = 9e-41
 Identities = 122/495 (24%), Positives = 227/495 (45%), Gaps = 22/495 (4%)

Query: 98  IRQLILDKLRDLGPAYIKGKPAGSWAALMLEQVENMHDFFARYLPQMSLSVLVPFVILAV 157
           +R+ + D + +L   Y   +  G   + +   V+ +       L  +    L     + +
Sbjct: 121 LRKKVFDNVMNLHVGYFSNQRKGDIISKISSDVQVVQFSVTGTLQVIFKEPLQLLAYIFM 180

Query: 158 VFPVNWAAGLIFLLTAPLVPLFMALVGIKAADASRKNFKALQRLSGHFYDR-LQALTTIR 216
           +F +++   +  LL  P+    +A + +K   A     + L  +   + D  L  +  I+
Sbjct: 181 LFAISYKLTIFSLLVIPVSAFVIAKI-VKRLKAQASQAQHLYGVMISYLDEALSGIKIIK 239

Query: 217 LFDRTTAETEHMRGASEVFRHRTMDVLRIAFLSSAVLEFFTSISIALTAVYFGFSYIG-- 274
            F+ T    +     +  +      + +   LSS V E      ++   +Y G   I   
Sbjct: 240 AFNATEMIKDKFHDENIKYSSLGKKMAKRQQLSSPVSETLGVAMVSGIVLYGGSLIINNQ 299

Query: 275 -ELNFGYYGASVTLFAGLFVLILAPEFYQPLRDLGTYYHAKQLAVGAAESIVDFLQTE-- 331
            EL+   + A + LF+         +  +P + L   + +    + A E ++D +  +  
Sbjct: 300 SELSASDFIAYIALFS---------QVMRPAKALTNAFSSIHSGLAAGERVLDLIDEKPA 350

Query: 332 VDTLHSGERHLSDNDDIEIIANDLVVLSPQGKRLAGPLSFTLQSGKTTALVGPSGAGKTS 391
           +          + ND I+I   DL    P G+ +   ++ T+  GK  ALVGPSG GK++
Sbjct: 351 ISDQKDAIEITAFNDKIDI--QDLSFSYP-GRPVLKDINLTIPKGKMVALVGPSGGGKST 407

Query: 392 LINTILGFM-PYQGSLTINGIELRELDHAQWRQTISWVGQNPLLLYGTIRDNVTLGKHNI 450
           +++ I  F+ P  G + I+G ++  +     R  +  V Q  +L   TI +N+  G  N 
Sbjct: 408 MMDLIPRFIEPDSGQVLIDGTDIAHVTMDSLRNMMGMVNQESILFNDTIFNNIAFGTPNA 467

Query: 451 ADEQVTQTLQAAYAQEFVEQQ--GLDYPISDRSAGLSVGQAQRLALARAILQNGRFWLLD 508
             E+V    + A A EF+ Q   G    + DR   LS GQ QR+ +ARA+L+N    LLD
Sbjct: 468 TAEEVEAAAKIANAHEFIVQSENGYQSNMGDRGLKLSGGQKQRICIARAVLKNPPIMLLD 527

Query: 509 EPTASLDARSEQYVMRGLTESIQQRTALFVTHQLQPLQSVEQILVMENGLLVQAGHFEDL 568
           E T++LD  SE+ V   L + ++ RT+L + H+L  +Q+ + I+V+E G +++ G+ ++L
Sbjct: 528 EATSALDTESEKLVQDALNKLMKNRTSLVIAHRLSTIQNADIIVVLEEGRIIEQGNHQEL 587

Query: 569 SQQSGLFATMLAANQ 583
             Q GL++ ++   Q
Sbjct: 588 MTQEGLYSKLVNMQQ 602