Pairwise Alignments

Query, 595 a.a., thiol reductant ABC exporter subunit CydD from Vibrio cholerae E7946 ATCC 55056

Subject, 591 a.a., ABC-type multidrug transport system, ATPase and permease components from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  180 bits (457), Expect = 1e-49
 Identities = 137/559 (24%), Positives = 265/559 (47%), Gaps = 31/559 (5%)

Query: 36  LFLVAQAALLASILHQLIIEQVDKHL-------LIPHFFGLAALIAVRALCSWGREIAGF 88
           +FL    A LA      I + +D+H+       L+   + L  L+ ++A+  +       
Sbjct: 37  IFLTVALAALAPTKPLFIQKAIDEHVALGDQEGLLRIIYLLVGLLILQAVVQFAHTYLSG 96

Query: 89  RCGEEIRRYIRQLILDKLRDLGPAYIKGKPAGSWAALMLEQVENMHDFFARYLPQMSLSV 148
             G+ I R IR  +   L  +   +    P G      +  +E++ + F+  L  +   +
Sbjct: 97  WIGQVIIRDIRVKLYRHLLKMRLKFFDNTPIGRLVTRNISDIESLSNVFSEGLAAIIGDL 156

Query: 149 LVPFVILAVVFPVNWAAGLIFLLTAPLVPLFMALVGIKAADASRKNFKALQRLSGHFYDR 208
           L  F IL V+F V+W   L+ L T PL+ +   +   K   A  +   A+  L+    + 
Sbjct: 157 LQLFTILGVMFWVDWKLTLVSLSTLPLLIISTYIFKEKVKVAFNEVRNAVSNLNSFLQEH 216

Query: 209 LQALTTIRLFDRTTAETEHMRGASEVFRHRTMDVLRIAFLSSAVLEFFTSISIALTAVYF 268
           +  +  +++F+R  +E +     +   +   +  +    +   V E   ++ I L  V++
Sbjct: 217 ITGMNIVQVFNREDSEYKKFDAINTEHKKANVKSVLYYAIYYPVAEIIQAVGIGLV-VWY 275

Query: 269 GFSYIGELNFGYYGASVTLFAGLFVLILAPEFYQPLRDLGTYYHAKQLAVGAAESIVDFL 328
           G +       G +G  + +   +  ++    F++P+R L   ++  Q+ V ++  I   L
Sbjct: 276 GAT-------GVFGLDLKVGVLISFIMYLQLFFRPIRMLADRFNTLQMGVVSSSRIFKLL 328

Query: 329 QTEVDTLHSGE---RHLSDNDDIEII---ANDLVVLSPQGKRLAGPLSFTLQSGKTTALV 382
           +++    + G      L  N  +E +    ND        + +   ++F ++ G+T ALV
Sbjct: 329 ESDEHIANEGNYSPEKLKGNIKLENVWFAYND-------EEWVLKDINFNVKHGETVALV 381

Query: 383 GPSGAGKTSLINTILGFMPY-QGSLTINGIELRELDHAQWRQTISWVGQNPLLLYGTIRD 441
           G +GAGK+S+IN I  F    +GS+ I+   +R+ +    R+ I  V Q+  L   TI  
Sbjct: 382 GATGAGKSSIINLISRFYEINKGSIKIDDQNIRDFELGTLRKHIGVVLQDVFLFSDTIYF 441

Query: 442 NVTLGKHNIADEQVTQTLQAAYAQEFVEQQ--GLDYPISDRSAGLSVGQAQRLALARAIL 499
           N+TLG  +I  EQV +  +   A++F+E+   GLDY + +R A LSVGQ Q ++  RA++
Sbjct: 442 NITLGNPDITREQVMEAAELVGAKKFIERLPGGLDYNVMERGATLSVGQRQLISFVRAMV 501

Query: 500 QNGRFWLLDEPTASLDARSEQYVMRGLTESIQQRTALFVTHQLQPLQSVEQILVMENGLL 559
            N    +LDE T+S+D  +E+ +   + + ++ RT++ + H+L  +Q    I+V+  G +
Sbjct: 502 YNPEIIILDEATSSVDTETEELIQNAIEKMMKGRTSIVIAHRLSTIQKAHNIIVLHKGEI 561

Query: 560 VQAGHFEDLSQQSGLFATM 578
            + G  + L ++ G +A +
Sbjct: 562 KEMGTHDTLLEKEGYYAQL 580