Pairwise Alignments

Query, 595 a.a., thiol reductant ABC exporter subunit CydD from Vibrio cholerae E7946 ATCC 55056

Subject, 595 a.a., ABC-type multidrug transport system, ATPase and permease components from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  160 bits (406), Expect = 1e-43
 Identities = 141/531 (26%), Positives = 247/531 (46%), Gaps = 37/531 (6%)

Query: 69  LAALIAVRALCSWGREIAGFRCGEEIRRYIRQLILDKLRDLGPAYIKGKPAGSWAALMLE 128
           L  ++ V+++ S+ R        E   R IR  +  +L +L  ++   +  G   + +  
Sbjct: 83  LIGILFVQSVFSFFRVWLFALVSERSMRDIRLSLYSRLVNLPMSFFDKRRTGELISRITS 142

Query: 129 QVENMHDFFARYLPQMSLSVLVPFVILAVVFPVNWAAGLIFLLTAPLVPLFMALVGIKAA 188
            V  + D F+  L ++   ++        +F       L  L T P++ +   + G    
Sbjct: 143 DVSLLQDTFSVTLAELFRQIITLLAGTVFLFVTTPRLTLFMLATFPVLVIIAMVFGKFIR 202

Query: 189 DASRKNFKALQRLSGHFYDRLQALTTIRLFDRTTAET-EHMRGASEVFRHRTMDV-LRIA 246
             S++    L   +    + LQ+++T++ F     E   + +G ++V +        R A
Sbjct: 203 KLSKETQDELAAANVIVEETLQSISTVKSFAGEAYEAARYGKGLNKVVKVALKAAGFRGA 262

Query: 247 FLSSAVLEFFTSISIAL----TAVYFGFSYIGEL-NFGYYGASVTLFAGLFVLILAPEFY 301
           F+S  +   F  I   +      V  G   IG+L +F  Y    T F G           
Sbjct: 263 FISFIIFALFGGIVAVMWYGAMMVSTGAMSIGDLVSFVLY----TTFIG----------- 307

Query: 302 QPLRDLGTYYHAKQLAVGAAESIVDFLQTEVDTLHSGERHLSDNDDIEIIAN----DLVV 357
             +  LG  Y   Q A+G++E +++ L        S E  L+D  ++ I  N    D+  
Sbjct: 308 GSIAGLGDIYGQVQKAIGSSERVLEILD------ESPEESLADYQEVSIKGNVSFSDVSF 361

Query: 358 LSPQGKR--LAGPLSFTLQSGKTTALVGPSGAGKTSLINTILGFMPYQ-GSLTINGIELR 414
             P      +   ++ ++QSG+  AL G SGAGK+++I  ++ F     G +TI+   ++
Sbjct: 362 NYPTRPEADVLKHINISIQSGEKIALAGHSGAGKSTIIQLLMKFYTINFGEITIDDKPIQ 421

Query: 415 ELDHAQWRQTISWVGQNPLLLYGTIRDNVTLGKHNIADEQVTQTLQAAYAQEFVEQ--QG 472
             +  Q R  I  V Q  LL  G+IR+N+   K    ++++ +  + A A +F+ +  +G
Sbjct: 422 NWNLKQLRSNIGIVPQEVLLFGGSIRENIAYAKPEATEQEIIEAAKKANAWQFIGKFPEG 481

Query: 473 LDYPISDRSAGLSVGQAQRLALARAILQNGRFWLLDEPTASLDARSEQYVMRGLTESIQQ 532
           LD  + +R   LS GQ QR+A+ARAIL+N    +LDE T+SLDA SE  V   L E ++ 
Sbjct: 482 LDTLVGERGIKLSGGQRQRIAIARAILKNPSILILDEATSSLDAESEALVQEALDELMKN 541

Query: 533 RTALFVTHQLQPLQSVEQILVMENGLLVQAGHFEDLSQQSGLFATMLAANQ 583
           RT + + H+L  ++ V++I VM++G +V+ G  +DL+ Q G F   L   Q
Sbjct: 542 RTTIVIAHRLATIRKVDRIYVMKDGEIVEEGSHDDLAVQKGGFYANLVKLQ 592