Pairwise Alignments

Query, 595 a.a., thiol reductant ABC exporter subunit CydD from Vibrio cholerae E7946 ATCC 55056

Subject, 582 a.a., Lipid A export ATP-binding/permease protein MsbA from Alteromonas macleodii MIT1002

 Score =  154 bits (390), Expect = 7e-42
 Identities = 130/500 (26%), Positives = 242/500 (48%), Gaps = 25/500 (5%)

Query: 91  GEEIRRYIRQLILDKLRDLGPAYIKGKPAGSWAALMLEQVENMHDFFARYLPQMSLSVLV 150
           G ++   +RQ + +K   L  A+      G   + +    E + +   + L  +     +
Sbjct: 91  GAQVVMRMRQQLFEKYIHLPVAFHDNHAVGGLISKVTYDTEQVANASGKALLTLVREGAL 150

Query: 151 PFVILAVVFPVNWAAGLIFLLTAPLVPLFMALVGIKAADASRKNFKALQRLSGHFYDRLQ 210
              +L V+F  +W   LIFLL  P+V + +++V  +    S+   +++  L+      ++
Sbjct: 151 VIGLLCVMFYYSWQLSLIFLLIGPIVAVIVSVVSKRFRVVSKNIQQSMGNLTSSVEQAVK 210

Query: 211 ALTTIRLFDRTTAETEHMRGASEVFRHRTMDVLRIAFLSSAVLEFFTSISIALTAVYFGF 270
               + +F     E +     +   R ++M +   + LS + ++   SI++A+  V F  
Sbjct: 211 GHKVVIMFGGQEIEQKRFEQKNNHNRQQSMKLNVTSILSVSSIQVIASIALAV--VLFIA 268

Query: 271 SYIGELNFGYYGASVTLFAGLFVLIL--APEFYQPLRDLGTYYHAKQLAVGAAESIVDFL 328
           S  G L          L AG+F+ ++       +PL+ L T  +  Q  + A  SI + L
Sbjct: 269 STPGMLE--------KLTAGVFINVVFCMVMLLKPLKQLTTINNQFQKGMAACASIFEIL 320

Query: 329 QTEVDTLHSGERHLSD-NDDIEIIANDLVVLSPQGKRLAG--PLSFTLQSGKTTALVGPS 385
             E D    G+  +      IE    D V  S  GK+      +SF    G++ ALVG S
Sbjct: 321 D-EADEEDKGKTKVERATGKIEF---DDVTFSYPGKQTPALSNVSFIANPGQSIALVGRS 376

Query: 386 GAGKTSLINTILGF-MPYQGSLTINGIELRELDHAQWRQTISWVGQNPLLLYGTIRDNVT 444
           G+GK+++ + +  F +P +G + ++   L ++D    R   + V QN  L   TI +N+ 
Sbjct: 377 GSGKSTISSLLTRFYVPQEGEIRLDDTALNDIDLKDLRAQFAVVSQNVTLFNDTIANNIA 436

Query: 445 LG-KHNIADEQVTQTLQAAYAQEFVEQ--QGLDYPISDRSAGLSVGQAQRLALARAILQN 501
            G + N++ + +    + A+ +EF+    +GLD  I +    LS GQ QR+A+ARAIL  
Sbjct: 437 YGARQNVSRKDIENAAKMAHVEEFLSNLPEGLDTVIGENGLMLSGGQRQRIAIARAILAE 496

Query: 502 GRFWLLDEPTASLDARSEQYVMRGLTESIQQR-TALFVTHQLQPLQSVEQILVMENGLLV 560
               +LDE T++LD  SE+ +   L E++Q+R T++ V H+L  +++ + I+V+E G ++
Sbjct: 497 APILILDEATSALDTESERLIQDAL-ETLQKRCTSIVVAHRLSTIENADCIMVVEQGRII 555

Query: 561 QAGHFEDLSQQSGLFATMLA 580
           + G   +L ++ G +A + A
Sbjct: 556 EKGKHNELLEKGGHYAQLHA 575