Pairwise Alignments

Query, 595 a.a., thiol reductant ABC exporter subunit CydD from Vibrio cholerae E7946 ATCC 55056

Subject, 587 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  181 bits (458), Expect = 1e-49
 Identities = 134/574 (23%), Positives = 268/574 (46%), Gaps = 14/574 (2%)

Query: 6   QRSLNLWLKQQSKLAKRWLAIAVGLGVLSSLFLVAQAALLASILHQLIIEQVDKHLLIPH 65
           ++ L    K+  K    W + A+   +L +      A ++  I++ + ++Q    +++  
Sbjct: 11  KKLLTRLFKENFKKHVGWYSAAIVAMLLVAGTTSLSAWIMRDIVNSVYLKQ-GFDVVLEI 69

Query: 66  FFGLAALIAVRALCSWGREIAGFRCGEEIRRYIRQLILDKLRDLGPAYIKGKPAGSWAAL 125
            F +AA+  V+ L ++ +     + G  I    ++ I D+L   G ++ +  P+      
Sbjct: 70  AFAVAAIFIVKGLATFVQSYYLSKAGNSIVAEQQRKIYDRLLKQGVSFFQNLPSSELLVR 129

Query: 126 MLEQVENMHDFFARYLPQMSLSVLVPFVILAVVFPVNWAAGLIFLLTAPLVPLFMALVGI 185
           +    +         +      +     ++ V+F  N+    I ++  P+    + LV  
Sbjct: 130 VTYNAQAARSVIDTIVTSFVRDLFSLLGLIIVMFAQNFLLSAISMIIGPVAIFSVRLVLR 189

Query: 186 KAADASRKNFKALQRLSGHFYDRLQALTTIRLFDRTTAETEHMRGASEVFRHRTMDVLRI 245
           +          +L  +     +    +  I+ F       + M  A     HR   + ++
Sbjct: 190 RVRKIMEAELASLGEIVNVVQETSIGVRVIKAFSLEKLMRQRMNKAVSDVEHRANGIAKL 249

Query: 246 AFLSSAVLEFFTSISIALTAVYFGFSYIGELNFGYYGASVTLFAGLFVLILAPEFYQPLR 305
              +S ++E  + ++IA+     G++ + +      G+   L A +  L+LA E  + L 
Sbjct: 250 EAATSPIMETLSGLAIAVVIAVSGYTVLEK-----GGSPGDLMAFITALLLAYEPAKRLA 304

Query: 306 DLGTYYHAKQLAVGAAESIVDFLQTEVDTLHSGER-HLSDNDDIEIIANDLVVLSPQGKR 364
            +        + V     ++D   T  +   +      S N +++ ++ + V   P  K 
Sbjct: 305 RMRVQIEGGMIGVRMMFEVLDAPLTLAEKKDAQPLPKASGNVELKNVSFEYVANQPVLK- 363

Query: 365 LAGPLSFTLQSGKTTALVGPSGAGKTSLINTILG-FMPYQGSLTINGIELRELDHAQWRQ 423
               +S   + GK TALVGPSG+GK+++IN ++  + P  GS+ ING++LR++  A  R+
Sbjct: 364 ---DVSVLFEGGKMTALVGPSGSGKSTIINLMMRLYDPQSGSVEINGMDLRDVSFASLRE 420

Query: 424 TISWVGQNPLLLYGTIRDNVTLGKHNIADEQVTQTLQAAYAQEFVEQQ--GLDYPISDRS 481
            +S+VGQ   L  GT++ N+++G+ N  DE++    +AA A +F+     G D  + +  
Sbjct: 421 HVSYVGQETFLFSGTVKHNISVGRDNATDEEIIAAAKAANAHDFIMNMPDGYDSKLGENG 480

Query: 482 AGLSVGQAQRLALARAILQNGRFWLLDEPTASLDARSEQYVMRGLTESIQQRTALFVTHQ 541
           +GLS GQ QR+A+ARA+L++    +LDE T++LD+ SE  V   L      +T++ + H+
Sbjct: 481 SGLSGGQRQRVAIARAMLRDADILILDEATSALDSESEALVRDALERLTLNKTSIVIAHR 540

Query: 542 LQPLQSVEQILVMENGLLVQAGHFEDLSQQSGLF 575
           L  +   ++I+VM+NG +V+ G   +L    GL+
Sbjct: 541 LSTINRADKIVVMDNGQVVEQGSRRELLATDGLY 574