Pairwise Alignments

Query, 595 a.a., thiol reductant ABC exporter subunit CydD from Vibrio cholerae E7946 ATCC 55056

Subject, 599 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  164 bits (414), Expect = 1e-44
 Identities = 162/593 (27%), Positives = 265/593 (44%), Gaps = 39/593 (6%)

Query: 5   KQRSLN--LWLKQQSKLAKRWLAIAVGLGVLSSLFLVAQAALLASILHQLIIEQVDKHLL 62
           KQRSL   L L    +  +  +A A+   VLSS   +A    +  I+     +  D  ++
Sbjct: 11  KQRSLKPLLGLFPYLRRYRGLMAAALFALVLSSATTLALPLAVRRIIDHGF-QTPDGGMI 69

Query: 63  IPHFFGLAALIAVRALCSWGREIAGFRCGEEIRRYIRQLILDKLRDLGPAYIKGKPAGSW 122
             +F  L A+  V AL S  R       GE +   +R+ +   L  L   +     +G  
Sbjct: 70  NSYFAMLLAIAVVLALASAMRYYYVMTIGERVVADLRRDVFAHLTTLSQQFFDSNRSGEL 129

Query: 123 AALMLEQVENMHDFFARYLPQMSLSVLVPFVIL---AVVFPVNWAAGL--IFLLTAPLVP 177
            + +      +   F       S SV +  +I+   AV   +  + GL  + LL  P + 
Sbjct: 130 TSRLTADTVQIRSAFGS-----SASVALRNIIMCCGAVAMMIYTSPGLSGLALLAIPFIV 184

Query: 178 LFMALVGIKAADASRKNFKALQRLSGHFYDRLQALTTIRLFDRTTAETEHMRGASEVFRH 237
             +   G      SR     L   + +  + + A  T++ F+           + E    
Sbjct: 185 FPLIAFGRSVRARSRTTQDTLANSAAYASETIAASRTVQSFNAEVLANARYGASVEA--- 241

Query: 238 RTMDVLRIAFLSSAVLEFFTSISIALTAVYFGFSYIGELNFGYY----GASVTLFAGLFV 293
                 R A  + +VL   T+++IAL    FG S +G L +G      G+      G FV
Sbjct: 242 -AYQGARAAIGARSVL---TAVAIALV---FG-SVVGILWYGAQNVLAGSMTAGTLGQFV 293

Query: 294 L--ILAPEFYQPLRDLGTYYHAKQLAVGAAESIVDFLQTEVDTLHSGE---RHLSDNDDI 348
           L  ++A      L  L   +     A GAAE + + L                     + 
Sbjct: 294 LYSVIAAS---GLGQLSEVWGELAQAGGAAERLSELLNERSPVAEPAAPVAMPQPPRGEA 350

Query: 349 EIIANDLVVLSPQGKRLAGPLSFTLQSGKTTALVGPSGAGKTSLINTILGFM-PYQGSLT 407
           E    D V     G+ +   LS  + +G+T A+VGPSGAGK+++ + ++ F  P QG +T
Sbjct: 351 EFDNVDFVYPLATGRPIVSGLSLKVAAGETVAIVGPSGAGKSTVFSLLMRFYDPQQGRIT 410

Query: 408 INGIELRELDHAQWRQTISWVGQNPLLLYGTIRDNVTLGKHNIADEQVTQTLQAAYAQEF 467
           I+G+++R +  A  R  +S V Q+  +   +I DN+  G+     E V     AA A  F
Sbjct: 411 IDGVDIRNVSLADLRARLSIVPQDVAIFASSIHDNIAFGRPEATREDVRAAAIAAQADGF 470

Query: 468 VEQ--QGLDYPISDRSAGLSVGQAQRLALARAILQNGRFWLLDEPTASLDARSEQYVMRG 525
           +E+   G D  + +R   LS GQ QR+A+ARAIL++    LLDE T++LDA SE  V + 
Sbjct: 471 IERLGDGYDTQVGERGVTLSGGQRQRIAIARAILRDAPILLLDEATSALDAESETLVQKA 530

Query: 526 LTESIQQRTALFVTHQLQPLQSVEQILVMENGLLVQAGHFEDLSQQSGLFATM 578
           L E ++ RT + + H+L  +   ++ILVM+ G +++ G  + L +Q+GL+A +
Sbjct: 531 LDELMKTRTTIVIAHRLATVLKADRILVMDEGRIIEEGTHQSLIRQNGLYARL 583