Pairwise Alignments

Query, 595 a.a., thiol reductant ABC exporter subunit CydD from Vibrio cholerae E7946 ATCC 55056

Subject, 600 a.a., Putative multidrug export ATP-binding/permease protein from Acinetobacter radioresistens SK82

 Score =  146 bits (368), Expect = 3e-39
 Identities = 131/516 (25%), Positives = 231/516 (44%), Gaps = 27/516 (5%)

Query: 75  VRALCSWGREIAGFRCGEEIRRYIRQLILDKLRDLGPAYI--KGKPAGSWAALMLEQVEN 132
           + AL S+G++  G +    + + + Q I++K      A+   +   AG     +   + +
Sbjct: 79  ISALVSFGQKFYGEKLRILVSQDLAQGIIEKFLTYRLAFFNQENNQAGKLQTRIDRGIGS 138

Query: 133 M----HDFFARYLPQMSLSVLVPFVILAVVFPVNWAAGLIFLLTAPLVPLFMALVGIKAA 188
           +      FF   LP  + ++    V L ++F  N   GL+ L   P V  ++     +  
Sbjct: 139 LTRLVQIFFIDILPLFTSAI----VALGLMFYANVWVGLVALCIVP-VYFWLTYKQAQKL 193

Query: 189 DASRKNFK-ALQRLSGHFYDRLQALTTIRLFDRTTAETEHMRGASEVFRHRTMDVLRIAF 247
              R+N +   ++ S      + ++T I+ F+R + E E      +      M   + +F
Sbjct: 194 GGWRRNLRDGREKKSQGILSIINSITVIKSFNRESIEAEKQLKLQKELTQNQMRTRQTSF 253

Query: 248 LSSAVLEFFTSISIALTAVYFGFSYI-GELNFGYYGASVTLFAGLFVLILAPEFYQPLRD 306
           L   +  F   I I L  +   +  + G+++ G     V LF  +           P+R 
Sbjct: 254 LFDGMKTFIEQIGIVLIIILTAYFVLSGQMSIGMIMYHVLLFNNVSA---------PIRS 304

Query: 307 LGTYYHAKQLAVGAAESIVDFLQTEVDTLHSGERHLSDNDDIEIIANDLVVLSPQGKRLA 366
           L   Y     A+  +ES    L+ + +   SG R        E+   D     P G    
Sbjct: 305 LHRIYDEVNDAMIYSESFFQILEADDEIESSGTRKPVIRGQFELENVDFYY--PNGHHAL 362

Query: 367 GPLSFTLQSGKTTALVGPSGAGKTSLINTILGF-MPYQGSLTINGIELRELDHAQWRQTI 425
             ++  +Q  + TALVG SGAGK++LI+ +  F +P  G L ++G+ + E+D A  R  I
Sbjct: 363 KNINMQIQPNRITALVGLSGAGKSTLISLLDKFYLPAPGKLYLDGVPIEEIDTAYLRDHI 422

Query: 426 SWVGQNPLLLYGTIRDNVTLGKHNIADEQVTQTLQAAYAQEFVEQQGLDYPISDRSAGLS 485
             V Q   +  G+I +N+  GK + + ++V +  + A   E + Q  L +     +  LS
Sbjct: 423 GLVLQKNHIFQGSILENIRYGKTDASLDEVIEAARKASIHEQIMQ--LQHSYETDALMLS 480

Query: 486 VGQAQRLALARAILQNGRFWLLDEPTASLDARSEQYVMRGLTESIQQRTALFVTHQLQPL 545
            GQ QR+ALAR  L++     LDEPTASLDA + + + + L +  Q RT + ++H L  +
Sbjct: 481 GGQQQRIALARMFLKDPPIIFLDEPTASLDAIASEQIKQSLDKIKQGRTVIIISHSLSQI 540

Query: 546 QSVEQILVMENGLLVQAGHFEDLSQQSGLFATMLAA 581
              +   VM+ G +V+ G  + L  Q G++  +  A
Sbjct: 541 IDADYTYVMKEGRIVEHGEHDALYHQDGVYKEIFNA 576