Pairwise Alignments

Query, 573 a.a., cysteine/glutathione ABC transporter ATP-binding protein/permease CydC from Vibrio cholerae E7946 ATCC 55056

Subject, 618 a.a., Efflux ABC transporter, permease/ATP-binding protein Atu2242 from Variovorax sp. SCN45

 Score =  176 bits (446), Expect = 2e-48
 Identities = 134/448 (29%), Positives = 218/448 (48%), Gaps = 33/448 (7%)

Query: 142 VTVGVLGIAALTTLIAWFDPQLGMTLGAILLLVLLVWPTLFY--RLGKKNGQHLTQNKAE 199
           V +GV  +A +  L+   D QL      ++ LVL V   +++  RLGK  G+     +A 
Sbjct: 163 VAMGVY-VATMIILVGVLDAQLVWPF--LIWLVLYVVSLIYFVPRLGKV-GKAQADARAL 218

Query: 200 LRVRTLDWLQGYSELTIFGAEQTYRQAILTAQDKLLRNQYVNAQ-VSGLAQSLLLLANGW 258
           +  R  D     + + +F   Q        A  + +   Y   + VS        L+ G 
Sbjct: 219 MTGRVTDAYTNIATVKLFSHTQREAGFARDAMREFMHTGYGQMRLVSAFEIVNHTLSMGL 278

Query: 259 TLVLM---IWLAADGVGGQTPDPLIALVAFATMASVEL-------LMPIAGAFQHLGQTL 308
           T  +    +WL ++G  G      +  VA AT  ++ L       +  +   F+++G   
Sbjct: 279 TAGMAGMALWLWSNGAVG------VGAVAAATAMALRLQGMSHWIMWEMTSLFENIGTVQ 332

Query: 309 TSARRLNEIILAKPEVEFTAQPTAHNGQYNIEFNGVHFAYQANKPKAIDDFTLTLAQGQK 368
              + L+         + T        Q  + F    F Y     + IDD  LT+  G+K
Sbjct: 333 DGMKTLSRPRTVLDAADATVLQVP---QGEVRFEHASFRYGDGGRRVIDDLNLTVKPGEK 389

Query: 369 VAIVGQTGSGKSTLIQLLCRYWDVQQGQITIGGTDIREWRESDLRAAISVVSQRVDILNG 428
           + +VG++G+GKSTL+ LL R+ D++ G+I I G DI    +  LR+ I +V+Q   +++ 
Sbjct: 390 IGLVGRSGAGKSTLVNLLLRFHDLESGRILIDGQDIAHVTQDSLRSHIGMVTQDTSLMHR 449

Query: 429 TLRDNLKLAKPDATDEALSDILQQVGLEKLLQ---DAA----LNTWLGEGGRQLSGGEKR 481
           ++ DN+   +PDAT E +    ++      +Q   DA         +GE G +LSGG+++
Sbjct: 450 SVADNVAYGRPDATREQIEAAARRAEAHDFIQTLGDAGGRRGYEAHVGERGVKLSGGQRQ 509

Query: 482 RLGIARALLHNAPILLLDEPTEGLDKQTEQQIMQLLHCHFGHKTVLFITHRLVNLEQMDA 541
           R+ IAR +L +APILLLDE T  LD + E  I Q L+     KTV+ I HRL  +  MD 
Sbjct: 510 RVAIARVMLKDAPILLLDEATSALDSEVEAAIQQSLYTLMEGKTVIAIAHRLSTIAAMDR 569

Query: 542 IALIEQGQLVEYGHHHTLLAQHGRYHKL 569
           + ++++G++VE G H TL+AQ G Y +L
Sbjct: 570 LIVLDEGRVVEEGDHRTLMAQGGLYARL 597