Pairwise Alignments

Query, 573 a.a., cysteine/glutathione ABC transporter ATP-binding protein/permease CydC from Vibrio cholerae E7946 ATCC 55056

Subject, 586 a.a., Efflux ABC transporter, permease/ATP-binding protein from Variovorax sp. SCN45

 Score =  186 bits (473), Expect = 2e-51
 Identities = 166/587 (28%), Positives = 281/587 (47%), Gaps = 40/587 (6%)

Query: 4   LLPYLKLYKKHWFGLTLGMLLALLTVLA-SIGLLTL-SGWFLSAAAVAGLSIARETFNYM 61
           L P+L+ Y+       + +++A +T LA  I L +L  G F++    A     R+ F  +
Sbjct: 12  LSPFLRPYRVQIVLAGVFLVMAAVTTLAFPIALRSLIDGGFVNPDKGAQTMALRDHFGAL 71

Query: 62  LPGAFVRG-FAMGR--TAGRWGERVVTHNATFKLLTDLRVFFFEKLTPLIPGRLSAVRDA 118
              A   G F+  R  T    GERV           D+R   + ++    P      +  
Sbjct: 72  FAVAVALGLFSAARFYTVSWLGERVTA---------DIRNAVYGRVLKQSPAFFETTQTG 122

Query: 119 DMLNRIVADVDAMDHVY-LRLINPVTVGVLGIAALTTLIAWFDPQLGMTLGAILLLVLLV 177
           ++L+R+ AD   +  V    L   +   V+G+ AL  L+ W +P + + +  IL+LV+L 
Sbjct: 123 EVLSRLTADTTLVQTVVGSSLSMGLRNAVMGVGALAVLV-WTNPYVMVQVLGILVLVVL- 180

Query: 178 WPTLFYRLGKKNGQHLTQNK-AELRVRTLDWLQGYSELTIFGAEQTYRQAILTAQDKLLR 236
            P++++    +     +Q++ A+      + L     +  + AE         + +   R
Sbjct: 181 -PSMWFGRRVRKLSRASQDRVADSSAIAAEVLNAIPVVQSYTAEGREASRFNGSTENAFR 239

Query: 237 NQYVNAQVSGLAQSLLLLANGWTLVLMIWLAADGV--GGQTPDPL------IALVAFATM 288
                 +   +  + +++A    L+  ++     V  G  T   L      +A++A AT 
Sbjct: 240 TAVRRTKARSVLVAFIIIATSAALLWGLYQGTQAVLRGDITAGHLGQTVVYVAILASATA 299

Query: 289 ASVEL---LMPIAGAFQHLGQTLTSARRLNEIILAKPEVEFTAQPTAHNGQYNIEFNGVH 345
              E+   L+  AGA + L + L +   +     A P V  T  P A +    I F+ V 
Sbjct: 300 VLGEVYGDLLRAAGATERLMELLHAPSAI--FSPANPAV--TPVPAAGSA---IRFDAVT 352

Query: 346 FAYQANK-PKAIDDFTLTLAQGQKVAIVGQTGSGKSTLIQLLCRYWDVQQGQITIGGTDI 404
           F Y +     A+ DF+L +A G+ VA+VG +G+GKST+ QLL RY+D Q G++ + G  +
Sbjct: 353 FHYPSRPGTPALRDFSLDVAPGETVALVGSSGAGKSTVFQLLLRYYDPQSGRLILDGAPL 412

Query: 405 REWRESDLRAAISVVSQRVDILNGTLRDNLKLAKPDATDEALSDILQQVGLEKLLQ--DA 462
                SDLR  I +V Q   I + +  +N++  +P+AT E +    +       LQ    
Sbjct: 413 ASLALSDLRTRIGLVPQDAVIFSTSAFENIRYGRPEATAEEVHAAARAAFAHDFLQALPE 472

Query: 463 ALNTWLGEGGRQLSGGEKRRLGIARALLHNAPILLLDEPTEGLDKQTEQQIMQLLHCHFG 522
             +T+LGE G +LSGG+++R+ IARA+L N P+LLLDE T  LD ++E+ +   L     
Sbjct: 473 GYDTFLGERGVRLSGGQRQRIAIARAILKNPPLLLLDEATSALDAESERMVQAALESAME 532

Query: 523 HKTVLFITHRLVNLEQMDAIALIEQGQLVEYGHHHTLLAQHGRYHKL 569
            +T L I HRL  +++ D I +++ G +VE G H  L+AQ G Y +L
Sbjct: 533 GRTTLVIAHRLATVQKADRIIVLDHGGIVEQGTHAALVAQGGVYARL 579