Pairwise Alignments

Query, 573 a.a., cysteine/glutathione ABC transporter ATP-binding protein/permease CydC from Vibrio cholerae E7946 ATCC 55056

Subject, 1191 a.a., Heterodimeric efflux ABC transporter, permease/ATP-binding subunit 1 / Heterodimeric efflux ABC transporter, permease/ATP-binding subunit 2 from Variovorax sp. SCN45

 Score =  234 bits (597), Expect = 1e-65
 Identities = 176/568 (30%), Positives = 269/568 (47%), Gaps = 30/568 (5%)

Query: 15   WFGLTLG-MLLALLTVLASIGLLTLSGWFLSAAAVAGLSIARETFNYMLPGAFVRGFAMG 73
            W G  +  +LL +  V A IG+       LSA  VA +   R T       A V G  + 
Sbjct: 619  WRGTLIATILLGVARVAAFIGV-----GVLSALVVAAIRDDRAT------SALVVGLLVA 667

Query: 74   RTAG---RWGERVVTHNATFKLLTDLRVFFFEKLTPLIPGRLSAVRDADMLNRIVADVDA 130
                    W E  + H   ++LL D+RV  ++KL  L P  L   R  D++     DV+ 
Sbjct: 668  APLAALFHWLESWLAHAMAYQLLADMRVKLYDKLERLAPAYLLQRRSGDLVALATHDVEM 727

Query: 131  MDHVYLRLINPVTVGVLGIAALTTLIAWFDPQLGMTLGAILLLVLLVWPTLFYRLGKKNG 190
            +++ Y   I P  V VL    +   +A +   + + L   L   L V P    R     G
Sbjct: 728  VEYFYAHTIAPAIVSVLVPLTVLCFLAVYSWPVALALLPFLAYAL-VSPINGRRKIDALG 786

Query: 191  QHLTQNKAELRVRTLDWLQGYSELTIFGAEQTYRQAILTAQDKLLRNQY-----VNAQVS 245
                    E+   T D +QG ++LT F A    R   L   D+    +      ++ Q +
Sbjct: 787  DRARHALGEMSAHTADTIQGLADLTAFQATGRRRVQFLEIADQCRARRLDMLADLSRQTA 846

Query: 246  GLAQSLLLLANGWTLVLMIWLAADGVGGQTPDPLIALVAFATMASVELLMPIAGAFQHLG 305
                ++ L       V  + +AA  +      PL+ L+A AT   V  +  ++   + L 
Sbjct: 847  WFEVAMGLGGLAVAAVGALQVAAGALSAGML-PLLVLIALATFLPVSEISQVS---RQLA 902

Query: 306  QTLTSARRLNEIILAKPE--VEFTAQPTAHNGQYNIEFNGVHFAYQANKPKAIDDFTLTL 363
             T+ + RRL+ ++  +PE   +    P   +   ++ F  V FAY       + D +  +
Sbjct: 903  DTIAATRRLH-VVNNEPEPVADGPLPPPEASHGLSLAFERVSFAYPGKPQDTLRDLSFVV 961

Query: 364  AQGQKVAIVGQTGSGKSTLIQLLCRYWDVQQGQITIGGTDIREWRESDLRAAISVVSQRV 423
              G  VA+VG +G+GKST+  L+ R+WD +QG + + G D+R+ R   LR  +++V+Q  
Sbjct: 962  PAGATVAVVGASGAGKSTVASLMLRFWDPRQGTVKLDGVDVRQLRLDGLRERVALVTQDT 1021

Query: 424  DILNGTLRDNLKLAKPDATDEALSDILQQVGLEKLLQ--DAALNTWLGEGGRQLSGGEKR 481
             + N TL  N++LA+PDA+ E L+  LQQ  L   +Q     L T +GE G QLSGG+++
Sbjct: 1022 YLFNDTLEGNIRLARPDASREELALALQQAALSAFVQTLPEGLATRVGERGMQLSGGQRQ 1081

Query: 482  RLGIARALLHNAPILLLDEPTEGLDKQTEQQIMQLLHCHFGHKTVLFITHRLVNLEQMDA 541
            R+ IARA L NAP+L+LDE T  LD  +E Q+   L     H+T L + HRL  +   D 
Sbjct: 1082 RISIARAFLKNAPVLILDEATSHLDTLSEAQVRGALDVLMRHRTTLVVAHRLSTIRDADL 1141

Query: 542  IALIEQGQLVEYGHHHTLLAQHGRYHKL 569
            I ++E G L E G H  LL + G Y KL
Sbjct: 1142 ILVLENGALAEAGTHEQLLRRQGVYAKL 1169



 Score =  196 bits (498), Expect = 4e-54
 Identities = 154/562 (27%), Positives = 257/562 (45%), Gaps = 26/562 (4%)

Query: 21  GMLLALLTVLASIGLLTLSGWFLSAAAVAGLSIARETFNYMLPGAFVRGFAMGRTAGRWG 80
           G+ L LL + A I      G  L     A +  A    +++ P A      + R      
Sbjct: 6   GIFLGLLALAAGIARYVFLGQLL-----ARVFDAAPVKDWIAPAACAGAMVLLRALFDHL 60

Query: 81  ERVVTHNATFKLLTDLRVFFFEKLTPLIPGRLSAVRDADMLNRIVADVDAMDHVYLRLIN 140
             V  + ++  +   LR   ++++  L P   +  R   ++  +V  V+ +   + + + 
Sbjct: 61  RTVQANRSSADVQQALRARLYDRIVALGPAWFANQRTGGVMLTVVDGVEQLQTFFGQYLP 120

Query: 141 PVTVGVLGIAALTTLIAWFDPQLGMTLGAILLLVLLVWPTLFYRLGKKNGQHLTQNKAEL 200
            V +      A+  +IA++D    +   A  L  L   P   + L ++     T++  E 
Sbjct: 121 QVVIAAAAPFAIFAVIAFWDVPTALVFLAAALFALF-GPMAVHMLDRRASLARTRSLNEF 179

Query: 201 RVRTLDWLQGYSELTIFGAEQTYRQAILTAQDKLLRNQYVNAQVSGLAQSL--LLLANGW 258
               LD +QG   L  +G  + + + +     KL  + +    VS L + +  L +A G 
Sbjct: 180 GEEFLDAVQGLPTLKSYGQGKAWGERLAARARKLSDSTFWVLSVSLLTRGISDLGVALGA 239

Query: 259 TLVLMI--WLAADGVGGQTPDPLIALVAFATMASVELLMPIAGAFQHLGQTLTSARRLNE 316
            L L +  W  A G      D  +  +    MA  E+  P+      L + +        
Sbjct: 240 ALALTVGAWRVAAG------DMSVEALLIVLMAGTEIFRPLRDLRSVLHRGMLGQSAAAS 293

Query: 317 IILAKPEVEFTAQPTAH-------NGQYNIEFNGVHFAYQANKPKAIDDFTLTLAQGQKV 369
           I         TA P A          +  IEF+GV F+Y   +P A    +L +A G++V
Sbjct: 294 IHALMDAWPLTAAPDAQVVAGAPTRLEPTIEFDGVSFSYSPQRP-AHQGLSLRIAAGERV 352

Query: 370 AIVGQTGSGKSTLIQLLCRYWDVQQGQITIGGTDIREWRESDLRAAISVVSQRVDILNGT 429
            IVG +G+GKST+++LL R    Q G I +GG D+       L + +++VSQ + + +GT
Sbjct: 353 GIVGPSGAGKSTIVRLLLRECVPQAGTIRVGGLDVNRLDTQTLLSHMALVSQDITLFHGT 412

Query: 430 LRDNLKLAKPDATDEALSDILQQVGLEKLLQ--DAALNTWLGEGGRQLSGGEKRRLGIAR 487
           + DNL+L +PDAT E +    +   ++  +        T +GE G QLSGG+++R+ IAR
Sbjct: 413 IDDNLRLGRPDATHEQVRAAARAANIDDFIMALPQGYATAIGERGLQLSGGQRQRVAIAR 472

Query: 488 ALLHNAPILLLDEPTEGLDKQTEQQIMQLLHCHFGHKTVLFITHRLVNLEQMDAIALIEQ 547
           ALL +APIL+LDE    +D + E  I Q L      +T L + HRL ++   D   +++Q
Sbjct: 473 ALLRDAPILILDEALSSVDTENEALIQQALDRLMAGRTTLILAHRLASVIGADRCLVLDQ 532

Query: 548 GQLVEYGHHHTLLAQHGRYHKL 569
           G++VE G H  L+ Q G YH+L
Sbjct: 533 GRVVEQGPHAELMRQQGLYHRL 554