Pairwise Alignments

Query, 573 a.a., cysteine/glutathione ABC transporter ATP-binding protein/permease CydC from Vibrio cholerae E7946 ATCC 55056

Subject, 582 a.a., lipid A export ATP-binding/permease MsbA from Vibrio cholerae E7946 ATCC 55056

 Score =  189 bits (480), Expect = 3e-52
 Identities = 149/579 (25%), Positives = 273/579 (47%), Gaps = 32/579 (5%)

Query: 4   LLPYLKLYKKHWFGLTLGMLLALLTVLASIGLLTLSGWFLSAAAVAGLSIARETFNYMLP 63
           L  Y++LYK    GL +  +  ++   A   +++L    L      G   A   F  +LP
Sbjct: 16  LWTYIRLYKA---GLVVSTIALVINAAADTYMISL----LKPLLDEGFGNAESNFLRILP 68

Query: 64  GAFVRGFAMGRTAGRWGERVVTHNATFKLLTDLRVFFFEKLTPLIPGRLSAVRDADMLNR 123
              + G    R    +         +  ++  +R   F     +            +L+R
Sbjct: 69  -FMILGLMFVRGLSGFASSYCLSWVSGNVVMQMRRRLFNHFMHMPVRFFDQESTGGLLSR 127

Query: 124 IVADVDAMDHVYLRLINPVTVGVLGIAALTTLIAWFDPQLGMTLGAILLLVLLVWPTLFY 183
           I  D + +     R +  +      I  L TL+ W   QL + L  +  +V      +  
Sbjct: 128 ITYDSEQVAGATSRALVSIVREGASIIGLLTLMFWNSWQLSLVLIVVAPVVAFAISFVSK 187

Query: 184 RLGK--KNGQ----HLTQNKAELRVRTLDWLQGYSELTIFGAEQTYRQAILTAQDKLLRN 237
           R  K  +N Q    H+T +  ++       L+G+  +  +G ++  R+      + + + 
Sbjct: 188 RFRKISRNMQTAMGHVTSSAEQM-------LKGHKVVLSYGGQEVERKRFDKVSNSMRQQ 240

Query: 238 QYVNAQVSGLAQSLLLLANGWTLVLMIWLAA-DGVGGQ-TPDPLIALVA--FATMASVEL 293
                    +A  ++ +     L  +++LA+ D +  + TP     + +  F  M  ++ 
Sbjct: 241 TMKLVSAQSIADPVIQMIASLALFAVLFLASVDSIRAELTPGTFTVVFSAMFGLMRPLKA 300

Query: 294 LMPIAGAFQHLGQTLTSARRLNEIILAKPEVEFTAQPTAHNGQYNIEFNGVHFAYQANKP 353
           L  +   FQ       +   L ++   +   ++ A+    NG+ +++   V F YQ  + 
Sbjct: 301 LTSVTSEFQRGMAACQTLFGLMDLETERDNGKYEAERV--NGEVDVK--DVTFTYQGKEK 356

Query: 354 KAIDDFTLTLAQGQKVAIVGQTGSGKSTLIQLLCRYWDVQQGQITIGGTDIREWRESDLR 413
            A+   + ++ QG+ VA+VG++GSGKST+  L  R++DV  G I + G D+R+++ ++LR
Sbjct: 357 PALSHVSFSIPQGKTVALVGRSGSGKSTIANLFTRFYDVDSGSICLDGHDVRDYKLTNLR 416

Query: 414 AAISVVSQRVDILNGTLRDNLKLA-KPDATDEALSDILQQVGLEKLLQDA--ALNTWLGE 470
              ++VSQ V + N T+ +N+  A + + T E +    +Q    + +++    L+T +GE
Sbjct: 417 RHFALVSQNVHLFNDTIANNIAYAAEGEYTREQIEQAARQAHAMEFIENMPQGLDTVIGE 476

Query: 471 GGRQLSGGEKRRLGIARALLHNAPILLLDEPTEGLDKQTEQQIMQLLHCHFGHKTVLFIT 530
            G  LSGG+++R+ IARALL +AP+L+LDE T  LD ++E+ I   L     +KTVL I 
Sbjct: 477 NGTSLSGGQRQRVAIARALLRDAPVLILDEATSALDTESERAIQAALDELQKNKTVLVIA 536

Query: 531 HRLVNLEQMDAIALIEQGQLVEYGHHHTLLAQHGRYHKL 569
           HRL  +EQ D I ++++G+++E G H  LLAQ G Y +L
Sbjct: 537 HRLSTIEQADEILVVDEGEIIERGRHADLLAQDGAYAQL 575