Pairwise Alignments

Query, 573 a.a., cysteine/glutathione ABC transporter ATP-binding protein/permease CydC from Vibrio cholerae E7946 ATCC 55056

Subject, 582 a.a., lipid A ABC transporter ATP-binding protein/permease MsbA from Pectobacterium carotovorum WPP14

 Score =  184 bits (466), Expect = 1e-50
 Identities = 127/440 (28%), Positives = 230/440 (52%), Gaps = 15/440 (3%)

Query: 138 LINPVTVGVLGIAALTTLIAWFDPQLGMTLGAILLLVLLVWPTLFYRLGKKNGQHLTQNK 197
           LI  V  G   I  L  L+ ++  QL     +I+L+V+    ++  R+  K  +++++N 
Sbjct: 143 LITVVREGA-SIIGLFILMFYYSWQL-----SIILIVIAPIVSIAMRVVSKRFRNISKNM 196

Query: 198 AE----LRVRTLDWLQGYSELTIFGAEQTYRQAILTAQDKLLRNQYVNAQVSGLAQSLLL 253
            +    +   T   L+G+ E+ +FG +    +      +++ +        S ++  ++ 
Sbjct: 197 QDTMGHVTTSTEQMLKGHKEVLMFGGQDVETKRFDQVSNRMRQQGMKLVSASSISDPIIQ 256

Query: 254 LANGWTLVLMIWLAADGVGGQTPDPLIALVAFATM-ASVELLMPIAGAFQHLGQTLTSAR 312
           L     L  +++ A+     +T       V F++M A +  L  +        + + + +
Sbjct: 257 LIASLALAFVLYAASFPSVMETLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQ 316

Query: 313 RLNEIILAKPEVEFTAQPTAHNGQYNIEFNGVHFAYQANKPKAIDDFTLTLAQGQKVAIV 372
            L  I+  + E + T +      +  +EF  V+FAY   +  A+ +  L +  G+ VA+V
Sbjct: 317 TLFAILDMEQERD-TGKREIERAKGELEFRQVNFAYPGKENLALKNINLHIPAGKTVALV 375

Query: 373 GQTGSGKSTLIQLLCRYWDVQQGQITIGGTDIREWRESDLRAAISVVSQRVDILNGTLRD 432
           G++GSGKST+  LL R++D+Q G+I + G D+RE+R S LR  +++VSQ V + N T+ +
Sbjct: 376 GRSGSGKSTIASLLTRFYDIQSGEILLDGHDLREYRLSSLRNQVALVSQNVHLFNDTIAN 435

Query: 433 NLKLAKPDA-TDEALSDILQQVGLEKLLQ--DAALNTWLGEGGRQLSGGEKRRLGIARAL 489
           N+  A+ +  + E +    +       +   D  L+T +GE G  LSGG+++R+ IARAL
Sbjct: 436 NIAYARNEHYSREEIERAAKMAHAMDFINKMDHGLDTVIGENGVMLSGGQRQRIAIARAL 495

Query: 490 LHNAPILLLDEPTEGLDKQTEQQIMQLLHCHFGHKTVLFITHRLVNLEQMDAIALIEQGQ 549
           L ++PIL+LDE T  LD ++E+ I   L      +T + I HRL  +E+ D I +IE G+
Sbjct: 496 LRDSPILILDEATSALDTESERAIQAALDELQKDRTAVVIAHRLSTIEKADEILVIEDGR 555

Query: 550 LVEYGHHHTLLAQHGRYHKL 569
           ++E G+H  LLA +G Y +L
Sbjct: 556 IIERGNHAALLAANGAYAQL 575