Pairwise Alignments

Query, 573 a.a., cysteine/glutathione ABC transporter ATP-binding protein/permease CydC from Vibrio cholerae E7946 ATCC 55056

Subject, 582 a.a., lipid A ABC transporter ATP-binding protein/permease MsbA from Pantoea agglomerans CFBP13505 P0401

 Score =  186 bits (471), Expect = 3e-51
 Identities = 133/462 (28%), Positives = 229/462 (49%), Gaps = 22/462 (4%)

Query: 120 MLNRIVADVDAMDHVYLRLINPVTVGVLGIAALTTLIAWFDPQLGMTLGAILLLVLLVWP 179
           +L+RI  D + +       +  V      I  L  ++ ++  QL + L  +  +V     
Sbjct: 124 LLSRITYDSEQVASSSSGALVTVVREGASIIGLFIMMFYYSWQLSLILIVLAPIVSFAIR 183

Query: 180 TLFYRLGKKNGQHLTQNKAELRVRTLDWLQGYSELTIFGAEQTYRQAILTAQDKLLRNQY 239
           T+  R  +   + +     ++       L+G+ E+ IFG +    +      +++ +   
Sbjct: 184 TVSKRF-RTISKSMQNTMGQVTTSAEQMLKGHKEVLIFGGQDIESERFSRVSNRMRQQGM 242

Query: 240 VNAQVSGLAQSLLLLANGWTLVLMIWLAADGVGGQTPDPLIALVAFATM-ASVELLMPIA 298
                S ++  ++ L     L  +++ A+      T       V F++M A +  L  + 
Sbjct: 243 KLVSASSISDPIIQLIASLALAFVLYAASFPSVMDTLTAGTITVVFSSMIALMRPLKSLT 302

Query: 299 GAFQHLGQTLTSARRLNEIILAKPEVEF-TAQPTAHNGQYNIEFNGVHFAYQANKPKAID 357
                  + + + + L  I+ ++ EV+  T + T   G  +IEF  V F Y   +  A+ 
Sbjct: 303 NVNAQFQRGMAACQTLFSILDSEQEVDNGTREITRAKG--DIEFRDVTFTYPGREIPALR 360

Query: 358 DFTLTLAQGQKVAIVGQTGSGKSTLIQLLCRYWDVQQGQITIGGTDIREWRESDLRAAIS 417
           +  L+L  G+ VA+VG++GSGKST+  LL R++D+QQG+I + G D+RE+    LR  ++
Sbjct: 361 NINLSLPAGKTVALVGRSGSGKSTMASLLTRFYDIQQGEILLDGHDLREYSLRSLRNQVA 420

Query: 418 VVSQRVDILNGTLRDNLKLAKPD----------ATDEALSDILQQVGLEKLLQDAALNTW 467
           +VSQ V + N T+ +N+  A+ +          AT     D + ++       D  L+T 
Sbjct: 421 LVSQNVHLFNDTIANNIAYARSEQYSREEIEHAATMAHAMDFINKM-------DKGLDTM 473

Query: 468 LGEGGRQLSGGEKRRLGIARALLHNAPILLLDEPTEGLDKQTEQQIMQLLHCHFGHKTVL 527
           +GE G  LSGG+++R+ IARALL + PIL+LDE T  LD ++E+ I   L     ++T L
Sbjct: 474 IGENGVLLSGGQRQRIAIARALLRDCPILILDEATSALDTESERAIQSALDELQKNRTSL 533

Query: 528 FITHRLVNLEQMDAIALIEQGQLVEYGHHHTLLAQHGRYHKL 569
            I HRL  +E+ D I +IE GQ+VE G H  LLA+ G Y +L
Sbjct: 534 VIAHRLSTIEKADEIVVIEDGQIVERGTHQVLLAERGAYAQL 575