Pairwise Alignments

Query, 573 a.a., cysteine/glutathione ABC transporter ATP-binding protein/permease CydC from Vibrio cholerae E7946 ATCC 55056

Subject, 582 a.a., Lipid A export ATP-binding/permease protein MsbA (EC 3.6.3.25) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  179 bits (455), Expect = 2e-49
 Identities = 141/532 (26%), Positives = 254/532 (47%), Gaps = 37/532 (6%)

Query: 48  VAGLSIARETFNYMLPGAFVRGFAMGRTAGRWGERVVTHNATFKLLTDLRVFFFEKLTPL 107
           V GL I R   +Y+   ++   +  G+       R+  H      +  + V FF+K +  
Sbjct: 71  VIGLMILRGITSYI--SSYCISWVSGKVVMTMRRRLFGH------MMGMPVAFFDKQST- 121

Query: 108 IPGRLSAVRDADMLNRIVADVDAMDHVYLRLINPVTVGVLGIAALTTLIAWFDPQLGMTL 167
                       +L+RI  D + +       +  V      I  L  ++ ++  QL    
Sbjct: 122 ----------GTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQL---- 167

Query: 168 GAILLLVLLVWPTLFYRLGKKNGQHLTQNK----AELRVRTLDWLQGYSELTIFGAEQTY 223
            +I+L+VL    ++  R+  K  + +++N      ++       L+G+ E+ IFG ++  
Sbjct: 168 -SIILVVLAPIVSIAIRVVSKRFRSISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVE 226

Query: 224 RQAILTAQDKLLRNQYVNAQVSGLAQSLLLLANGWTLVLMIWLAA-DGVGGQTPDPLIAL 282
            +      +K+          S ++  ++ L     L  +++ A+   V        I +
Sbjct: 227 TKRFDKVSNKMRLQGMKMVSASSISDPIIQLIASLALAFVLYAASFPSVMDSLTAGTITV 286

Query: 283 VAFATMASVELLMPIAGAFQHLGQTLTSARRLNEIILAKPEVEFTAQPTAHNGQYNIEFN 342
           V  + +A +  L  +        + + + + L  I+ ++ E +   +        ++EF 
Sbjct: 287 VFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDSEQEKD-EGKRVIDRATGDLEFR 345

Query: 343 GVHFAYQANKPKAIDDFTLTLAQGQKVAIVGQTGSGKSTLIQLLCRYWDVQQGQITIGGT 402
            V F Y   +  A+ +  L +  G+ VA+VG++GSGKST+  L+ R++D+ +G I + G 
Sbjct: 346 NVTFTYPGREVPALRNINLKIPAGKTVALVGRSGSGKSTIASLITRFYDIDEGHILMDGH 405

Query: 403 DIREWRESDLRAAISVVSQRVDILNGTLRDNLKLAKPDA-----TDEALSDILQQVGLEK 457
           D+RE+  + LR  +++VSQ V + N T+ +N+  A+ +       +EA         + K
Sbjct: 406 DLREYTLASLRNQVALVSQNVHLFNDTVANNIAYARTEEYSREQIEEAARMAYAMDFINK 465

Query: 458 LLQDAALNTWLGEGGRQLSGGEKRRLGIARALLHNAPILLLDEPTEGLDKQTEQQIMQLL 517
           +  D  L+T +GE G  LSGG+++R+ IARALL ++PIL+LDE T  LD ++E+ I   L
Sbjct: 466 M--DNGLDTIIGENGVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAAL 523

Query: 518 HCHFGHKTVLFITHRLVNLEQMDAIALIEQGQLVEYGHHHTLLAQHGRYHKL 569
                ++T L I HRL  +EQ D I ++E G +VE G H  LLAQHG Y +L
Sbjct: 524 DELQKNRTSLVIAHRLSTIEQADEIVVVEDGIIVERGTHSELLAQHGVYAQL 575