Pairwise Alignments

Query, 573 a.a., cysteine/glutathione ABC transporter ATP-binding protein/permease CydC from Vibrio cholerae E7946 ATCC 55056

Subject, 582 a.a., fused lipid transporter subunits of ABC superfamily: membrane component/ATP-binding component (NCBI) from Escherichia coli BW25113

 Score =  173 bits (438), Expect = 2e-47
 Identities = 136/532 (25%), Positives = 253/532 (47%), Gaps = 37/532 (6%)

Query: 48  VAGLSIARETFNYMLPGAFVRGFAMGRTAGRWGERVVTHNATFKLLTDLRVFFFEKLTPL 107
           V GL I R   +Y+   ++   +  G+       R+  H      +  + V FF+K +  
Sbjct: 71  VIGLMILRGITSYV--SSYCISWVSGKVVMTMRRRLFGH------MMGMPVSFFDKQST- 121

Query: 108 IPGRLSAVRDADMLNRIVADVDAMDHVYLRLINPVTVGVLGIAALTTLIAWFDPQLGMTL 167
                       +L+RI  D + +       +  V      I  L  ++ ++  QL    
Sbjct: 122 ----------GTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQL---- 167

Query: 168 GAILLLVLLVWPTLFYRLGKKNGQHLTQNK----AELRVRTLDWLQGYSELTIFGAEQTY 223
            +I+L+VL    ++  R+  K  +++++N      ++       L+G+ E+ IFG ++  
Sbjct: 168 -SIILIVLAPIVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVE 226

Query: 224 RQAILTAQDKLLRNQYVNAQVSGLAQSLLLLANGWTLVLMIWLAA-DGVGGQTPDPLIAL 282
            +      +++          S ++  ++ L     L  +++ A+   V        I +
Sbjct: 227 TKRFDKVSNRMRLQGMKMVSASSISDPIIQLIASLALAFVLYAASFPSVMDSLTAGTITV 286

Query: 283 VAFATMASVELLMPIAGAFQHLGQTLTSARRLNEIILAKPEVEFTAQPTAHNGQYNIEFN 342
           V  + +A +  L  +        + + + + L  I+ ++ E +   +        ++EF 
Sbjct: 287 VFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFTILDSEQEKD-EGKRVIERATGDVEFR 345

Query: 343 GVHFAYQANKPKAIDDFTLTLAQGQKVAIVGQTGSGKSTLIQLLCRYWDVQQGQITIGGT 402
            V F Y      A+ +  L +  G+ VA+VG++GSGKST+  L+ R++D+ +G+I + G 
Sbjct: 346 NVTFTYPGRDVPALRNINLKIPAGKTVALVGRSGSGKSTIASLITRFYDIDEGEILMDGH 405

Query: 403 DIREWRESDLRAAISVVSQRVDILNGTLRDNLKLAKPDA-----TDEALSDILQQVGLEK 457
           D+RE+  + LR  +++VSQ V + N T+ +N+  A+ +       +EA         + K
Sbjct: 406 DLREYTLASLRNQVALVSQNVHLFNDTVANNIAYARTEQYSREQIEEAARMAYAMDFINK 465

Query: 458 LLQDAALNTWLGEGGRQLSGGEKRRLGIARALLHNAPILLLDEPTEGLDKQTEQQIMQLL 517
           +  D  L+T +GE G  LSGG+++R+ IARALL ++PIL+LDE T  LD ++E+ I   L
Sbjct: 466 M--DNGLDTVIGENGVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAAL 523

Query: 518 HCHFGHKTVLFITHRLVNLEQMDAIALIEQGQLVEYGHHHTLLAQHGRYHKL 569
                ++T L I HRL  +E+ D I ++E G +VE G H+ LL   G Y +L
Sbjct: 524 DELQKNRTSLVIAHRLSTIEKADEIVVVEDGVIVERGTHNDLLEHRGVYAQL 575