Pairwise Alignments

Query, 573 a.a., cysteine/glutathione ABC transporter ATP-binding protein/permease CydC from Vibrio cholerae E7946 ATCC 55056

Subject, 583 a.a., lipid A export permease/ATP-binding protein MsbA from Enterobacter asburiae PDN3

 Score =  181 bits (458), Expect = 9e-50
 Identities = 142/533 (26%), Positives = 258/533 (48%), Gaps = 39/533 (7%)

Query: 48  VAGLSIARETFNYMLPGAFVRGFAMGRTAGRWGERVVTHNATFKLLTDLRVFFFEKLTPL 107
           V GL I R   +Y+   ++   +  G+       R+ +H      +  + V FF+K +  
Sbjct: 71  VIGLMILRGITSYI--SSYCISWVSGKVVMTMRRRLFSH------MMGMPVSFFDKQST- 121

Query: 108 IPGRLSAVRDADMLNRIVADVDAM-DHVYLRLINPVTVG--VLGIAALTTLIAWFDPQLG 164
                       +L+RI  D + +       LI  V  G  ++G+ A+    +W   QL 
Sbjct: 122 ----------GTLLSRITYDSEQVASSSSSALITVVREGASIIGLFAMMFYYSW---QL- 167

Query: 165 MTLGAILLLVLLVWPTLFYRLGKKNGQHLTQNK----AELRVRTLDWLQGYSELTIFGAE 220
               +I+L+VL    ++  R+  K  +++++N      ++       L+G+ E+ IFG +
Sbjct: 168 ----SIILIVLAPIVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQ 223

Query: 221 QTYRQAILTAQDKLLRNQYVNAQVSGLAQSLLLLANGWTLVLMIWLAADGVGGQTPDPLI 280
               +      +K+          S ++  ++ L     L  +++ A+     +T     
Sbjct: 224 DVETKRFDKVSNKMRLQGMKMVSASSISDPIIQLIASLALAFVLYAASFPSVMETLTAGT 283

Query: 281 ALVAFATM-ASVELLMPIAGAFQHLGQTLTSARRLNEIILAKPEVEFTAQPTAHNGQYNI 339
             V F++M A +  L  +        + + + + L  I+ ++ E +   +        ++
Sbjct: 284 ITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFSILDSEQEKD-EGKRVIERANGDV 342

Query: 340 EFNGVHFAYQANKPKAIDDFTLTLAQGQKVAIVGQTGSGKSTLIQLLCRYWDVQQGQITI 399
           EF  V F Y   +  A+ +  L++  G+ VA+VG++GSGKST+  L+ R++D+ +G+I +
Sbjct: 343 EFRNVTFTYPGREVPALRNINLSIPAGKTVALVGRSGSGKSTIASLMTRFYDINEGEILL 402

Query: 400 GGTDIREWRESDLRAAISVVSQRVDILNGTLRDNLKLAKPDA-TDEALSDILQQVGLEKL 458
            G D+RE+    LR  +++VSQ V + N T+ +N+  A+ D  + E + +  +       
Sbjct: 403 DGHDLREYTLQSLRNQVALVSQNVHLFNDTVANNIAYARTDEYSREQIENAARMAYAMDF 462

Query: 459 LQ--DAALNTWLGEGGRQLSGGEKRRLGIARALLHNAPILLLDEPTEGLDKQTEQQIMQL 516
           +   D  L+T +GE G  LSGG+++R+ IARALL ++PIL+LDE T  LD ++E+ I   
Sbjct: 463 INKMDNGLDTIIGENGVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQSA 522

Query: 517 LHCHFGHKTVLFITHRLVNLEQMDAIALIEQGQLVEYGHHHTLLAQHGRYHKL 569
           L     ++T L I HRL  +EQ D I ++E G +VE G H  LL   G Y +L
Sbjct: 523 LDELQKNRTSLVIAHRLSTIEQADEIVVVEDGVIVERGSHADLLEHRGVYAQL 575