Pairwise Alignments

Query, 573 a.a., cysteine/glutathione ABC transporter ATP-binding protein/permease CydC from Vibrio cholerae E7946 ATCC 55056

Subject, 582 a.a., lipid A ABC transporter ATP-binding protein/permease MsbA from Dickeya dadantii 3937

 Score =  181 bits (460), Expect = 5e-50
 Identities = 136/529 (25%), Positives = 253/529 (47%), Gaps = 29/529 (5%)

Query: 47  AVAGLSIARETFNYMLPGAFVRGFAMGRTAGRWGERVVTHNATFKLLTDLRVFFFEKLTP 106
           A+ GL I R   +Y+   ++   +  G+       R+ +H      +  + V FF++ + 
Sbjct: 70  AIIGLMIMRGISSYI--SSYCVAWVSGKVVMNMRRRLFSH------IMGMPVSFFDQQST 121

Query: 107 LIPGRLSAVRDADMLNRIVADVDAMDHVYLRLINPVTVGVLGIAALTTLIAWFDPQLGMT 166
                        +L+RI  D + +       +  V      I  L  L+ W+  QL + 
Sbjct: 122 -----------GTLLSRITYDSEQVAASSSNALVTVVREGASIIGLFVLMFWYSWQLSLI 170

Query: 167 LGAILLLVLLVWPTLFYRLGKKNGQHLTQNKAELRVRTLDWLQGYSELTIFGAEQTYRQA 226
           L  I  +V      +  R  +   + +     ++       L+G+ E+ IFG +    + 
Sbjct: 171 LVLIAPIVSYSMRVVSKRF-RSISKSMQNTMGQVTTSAEQMLKGHKEVLIFGGQTVEVER 229

Query: 227 ILTAQDKLLRNQYVNAQVSGLAQSLLLLANGWTLVLMIWLAADGVGGQTPDPLIALVAFA 286
             +  +++ +        S ++  ++ L     L  +++ A+     +T       V F+
Sbjct: 230 FDSVSNRMRQQGMKMVSASSISDPVVQLIASLALAFVLYAASFPSVMETLTAGTITVVFS 289

Query: 287 TMASV-ELLMPIAGAFQHLGQTLTSARRLNEIILAKPEVEFTAQPTAHNGQYNIEFNGVH 345
           +M ++   L  +        + + + + L  I+  + E + T      + + +I F  V+
Sbjct: 290 SMFTLMRPLKSLTNVNAQFQRGMAACQTLFTILDMEQEKD-TGTRVLEHAKGDIAFRDVN 348

Query: 346 FAYQANKPKAIDDFTLTLAQGQKVAIVGQTGSGKSTLIQLLCRYWDVQQGQITIGGTDIR 405
           FAY   +  A+ + +L +  G+ VA+VG++GSGKST+  L+ R++D+Q G+I + G D+R
Sbjct: 349 FAYPGKETLALKNISLHIPPGKTVALVGRSGSGKSTIANLITRFYDIQSGEILLDGHDLR 408

Query: 406 EWRESDLRAAISVVSQRVDILNGTLRDNLKLAKPDATDEALSDILQQVGLEKLLQ----- 460
           ++    LR+ +++VSQ V + N T+ +N+  A  D       DI +   +   +      
Sbjct: 409 DYTLPSLRSQVALVSQNVHLFNDTIANNIAYACGDRYSR--EDIERAAKMAHAMDFIGRL 466

Query: 461 DAALNTWLGEGGRQLSGGEKRRLGIARALLHNAPILLLDEPTEGLDKQTEQQIMQLLHCH 520
           +  L+T +GE G  LSGG+++R+ IARALL + PIL+LDE T  LD ++E+ I   L   
Sbjct: 467 EHGLDTVIGENGVLLSGGQRQRIAIARALLRDCPILVLDEATSALDTESERAIQAALDEL 526

Query: 521 FGHKTVLFITHRLVNLEQMDAIALIEQGQLVEYGHHHTLLAQHGRYHKL 569
             ++T L I HRL  +E+ D I ++E GQ++E G H  LLA++G Y +L
Sbjct: 527 QKNRTALVIAHRLSTIEKADEILVVEDGQIIERGQHSELLARNGAYAQL 575