Pairwise Alignments

Query, 321 a.a., 23S rRNA pseudouridylate synthase B from Vibrio cholerae E7946 ATCC 55056

Subject, 485 a.a., pseudouridine synthase from Rhodanobacter sp000427505 FW510-R12

 Score =  252 bits (644), Expect = 1e-71
 Identities = 147/311 (47%), Positives = 190/311 (61%), Gaps = 18/311 (5%)

Query: 1   MSEKLQKVLARAGHGSRRELEALIRAGRVSVNGKVAVLGERLEDDNAVVRIDGHVVSVKA 60
           + E+L KVLA AG GSRR LE  I++G V +NG  A +G  ++  + V+ +DG    V  
Sbjct: 24  LEERLHKVLANAGLGSRRMLEQRIQSGEVELNGAPASIGMSVKSGDRVI-MDGKQFVVAT 82

Query: 61  QEEVICRVLAYYKPEGELCTRHDPEGRRTVFDRLPKIRGSRWISVGRLDANTSGLLLFTT 120
                  VL Y+KPEGEL TR DPEGR TVF++LP+++G+RW++VGRLD NT+GLLL TT
Sbjct: 83  DSRDDTEVLIYHKPEGELTTREDPEGRPTVFEQLPRLKGARWVAVGRLDINTTGLLLLTT 142

Query: 121 DGELANRLMHPSRQVEREYLVRVFGDVTEEKVRNLVRGVQLEDGMARFEDVMYAGGEGIN 180
           DGELAN LMHP   +EREYL RV G+V +E +  L  GV+L+DG ARF+++      G +
Sbjct: 143 DGELANALMHPKSGLEREYLCRVHGEVPDEVIEKLKAGVELDDGPARFDEIAVISRGGSH 202

Query: 181 HTFYVVINEGRNREVRRLWESQGTTVSRLKRVRYGDIFLDKKLPRGGWMELDLKQVNYLR 240
             F VVI EGRNREVRRLW+SQG  VSRLKR+RYG I L + L RG    LD + V  LR
Sbjct: 203 SWFRVVIREGRNREVRRLWDSQGFLVSRLKRIRYGGIELPRHLRRGECEALDAEGVKQLR 262

Query: 241 ELVELRPEKETVLNMAPDAATRKRER---------------TRSQKIRRAVRRHEERISA 285
           +   L P  + VL ++P    R+  R               T  Q   R +R + +RI  
Sbjct: 263 QTSGLGP-AQPVLTLSPVLHQRRTSRNVTEYRPERGAGTAWTGGQDEARELRAY-DRIRE 320

Query: 286 TPGRSGKAPAR 296
            P R  K P R
Sbjct: 321 EPVRGRKPPRR 331