Pairwise Alignments

Query, 321 a.a., 23S rRNA pseudouridylate synthase B from Vibrio cholerae E7946 ATCC 55056

Subject, 177 a.a., pseudouridine synthase from Rhodanobacter sp000427505 FW510-R12

 Score = 83.2 bits (204), Expect = 4e-21
 Identities = 60/172 (34%), Positives = 86/172 (50%), Gaps = 18/172 (10%)

Query: 68  VLAYYKPEGELCTRHDPEGRRTVFDRLPKIRGSRWISVGRLDANTSGLLLFTTDGELANR 127
           +LA  KP G LC   D  GR T+ D + +       + GRLD ++ GLLL T DG LA+R
Sbjct: 2   LLALNKPYGVLCQFTDELGRATLADFVMQ---KDVYAAGRLDQDSEGLLLLTDDGRLAHR 58

Query: 128 LMHPSRQVEREYLVRVFGDVTEEKVRNLVRGVQLEDGMARFEDVMYAG------------ 175
           L  P  +  + YL +V G + E  +++L RGV L DG     +  +A             
Sbjct: 59  LTDPRHKQAKTYLAQVEGTIDEATLQSLRRGVVLNDGPTLPAEAAFAAKPDWLWPRDPPV 118

Query: 176 --GEGINHTFY-VVINEGRNREVRRLWESQGTTVSRLKRVRYGDIFLDKKLP 224
              + I  ++  + + EGRNR+VRR+  + G    RL RVR G+  LD   P
Sbjct: 119 RFRQSIPTSWLSLTLREGRNRQVRRMTAAVGFPTLRLIRVRIGEYALDGLAP 170