Pairwise Alignments

Query, 321 a.a., 23S rRNA pseudouridylate synthase B from Vibrio cholerae E7946 ATCC 55056

Subject, 211 a.a., pseudouridine synthase from Pseudomonas simiae WCS417

 Score = 82.8 bits (203), Expect = 7e-21
 Identities = 63/181 (34%), Positives = 93/181 (51%), Gaps = 22/181 (12%)

Query: 67  RVLAYYKPEGELCTRHDPEGRRTVFD--RLPKIRGSRWISVGRLDANTSGLLLFTTDGEL 124
           +++ + KP   L    D  GR T+ D   +P I        GRLD ++ GLLL T DG+L
Sbjct: 33  KLILFNKPFDVLTQFSDEGGRATLKDFIAIPGI-----YPAGRLDRDSEGLLLLTNDGQL 87

Query: 125 ANRLMHPSRQVEREYLVRVFGDVTEEKVRNLVRGVQLEDG-----MAR--FEDVMYAGGE 177
             R+  P  ++ + Y V+V G+ TEE+++ L  GV+L DG      AR   E  ++    
Sbjct: 88  QARIADPKHKLAKTYWVQVEGEPTEEQLQRLRDGVELNDGKTLPAQARQLDEPQLWPRNP 147

Query: 178 GI-------NHTFYVVINEGRNREVRRLWESQGTTVSRLKRVRYGDIFLDKKLPRGGWME 230
            +        +   +VI EGRNR+VRR+  + G    RL RVR GD  +D  L +G W E
Sbjct: 148 PVRFRKNIPTYWLELVIREGRNRQVRRMTAAVGLPTLRLVRVRIGDWTID-GLDQGQWKE 206

Query: 231 L 231
           +
Sbjct: 207 V 207