Pairwise Alignments

Query, 321 a.a., 23S rRNA pseudouridylate synthase B from Vibrio cholerae E7946 ATCC 55056

Subject, 188 a.a., LSU rRNA pseudouridine(2457) synthase (EC 5.4.99.20) from Sphingobium sp. HT1-2

 Score = 79.3 bits (194), Expect = 6e-20
 Identities = 61/181 (33%), Positives = 85/181 (46%), Gaps = 21/181 (11%)

Query: 67  RVLAYYKPEGELCTRHDPEG---RRTVFDRLPKIRGSRWISVGRLDANTSGLLLFTTDGE 123
           R++ + KP G LC   D      R T+ D + +         GRLD ++ GLLL T DG 
Sbjct: 3   RLILFNKPYGVLCQFSDERTGPPRPTLADYVDQ---PGVYPAGRLDLDSEGLLLLTDDGR 59

Query: 124 LANRLMHPSRQVEREYLVRVFGDVTEEKVRNLVRGVQLEDGMARFEDVMYAGGEGI---- 179
           L  R+  P  ++ + YLV+V GD  +  +  L RGVQL+DGM    +V       +    
Sbjct: 60  LQARIADPRFKIPKTYLVQVEGDPDDAPLAALRRGVQLKDGMTLPAEVERIDDPALWPRD 119

Query: 180 ----------NHTFYVVINEGRNREVRRLWESQGTTVSRLKRVRYGDIFLDKKLPRGGWM 229
                     +    + I EGRNR+VRR+  + G    RL R R GD  +D   P G W 
Sbjct: 120 PPVRFRKSVPDCWLRLTIREGRNRQVRRMTAAVGLPTLRLVRWRIGDWTIDDIAP-GSWR 178

Query: 230 E 230
           E
Sbjct: 179 E 179