Pairwise Alignments

Query, 321 a.a., 23S rRNA pseudouridylate synthase B from Vibrio cholerae E7946 ATCC 55056

Subject, 455 a.a., LSU rRNA pseudouridine(2605) synthase (EC 5.4.99.22) from Sphingobium sp. HT1-2

 Score =  128 bits (321), Expect = 3e-34
 Identities = 78/213 (36%), Positives = 115/213 (53%), Gaps = 5/213 (2%)

Query: 3   EKLQKVLARAGHGSRRELEALIRAGRVSVNGKVAVLGERLEDDNAVVRIDGHVVSVKAQE 62
           +++ K+LARAG  SRRE+E +I  GR++ +G        L      V +DG  V+  A  
Sbjct: 216 QRIAKLLARAGIASRREIERMIEEGRIARDGVTIDTPATLLTSLHGVTVDGDPVAAPAP- 274

Query: 63  EVICRVLAYYKPEGELCTRHDPEGRRTVFDRLPKIRGSRWISVGRLDANTSGLLLFTTDG 122
               R+  ++KP G L T  DP GR T++D LP     R + +GRLD NT GLLL TTDG
Sbjct: 275 ---ARLFLFHKPTGFLTTERDPAGRPTIYDILPDDL-PRLMPIGRLDMNTEGLLLLTTDG 330

Query: 123 ELANRLMHPSRQVEREYLVRVFGDVTEEKVRNLVRGVQLEDGMARFEDVMYAGGEGINHT 182
           E    +  P+  V R Y  R FG+V+++++ +L  G++++       +       G N  
Sbjct: 331 EFKREMELPATGVPRTYRARAFGEVSQQQLEDLFDGIEIDGIQYGPIEANLERRTGRNQW 390

Query: 183 FYVVINEGRNREVRRLWESQGTTVSRLKRVRYG 215
             + + EG+NREVRR+ E     V+RL R  YG
Sbjct: 391 IEMTLTEGKNREVRRVLEHFELKVNRLIRTSYG 423