Pairwise Alignments

Query, 321 a.a., 23S rRNA pseudouridylate synthase B from Vibrio cholerae E7946 ATCC 55056

Subject, 542 a.a., pseudouridylate synthase from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  139 bits (351), Expect = 1e-37
 Identities = 90/238 (37%), Positives = 134/238 (56%), Gaps = 10/238 (4%)

Query: 4   KLQKVLARAGHGSRRELEALIRAGRVSVNGKVAV-LGERLEDDNAVVRIDGHVVSVKAQE 62
           +L + +A AG  SRRE + LI +G + VNG+V   +G +++  + V     +   + ++E
Sbjct: 311 RLNRYIANAGVCSRREADVLIESGEIKVNGEVITEMGYKVQPTDNVY----YGKKLLSRE 366

Query: 63  EVICRVLAYYKPEGELCTRHDPEGRRTVFDRLPKIRGSRWISVGRLDANTSGLLLFTTDG 122
           +++  +L   KP+  L T  DPEGR+TV   +      R   VGRLD NT+GLLLFT DG
Sbjct: 367 KMVYVLLN--KPKDFLTTTDDPEGRKTVMSLVANASKERIFPVGRLDRNTTGLLLFTNDG 424

Query: 123 ELANRLMHPSRQVEREYLVRVFGDVTEEKVRNLVRGVQLEDGMARFEDVMYAGGEGINHT 182
           E+A +L HPS  +++ Y V +   +T+     +  GV+LEDG A  +DV   G    N  
Sbjct: 425 EVAQKLTHPSNNIKKIYQVELDKPITKADYVKVAEGVELEDGKAEVDDVAILGES--NKF 482

Query: 183 FYVVINEGRNREVRRLWESQGTTVSRLKRVRYGDIFLDKKLPRGGWMELDLKQVNYLR 240
             + I+ GRNR VRR++E  G  V  L RV+Y  +   K +PRG W  L  K+V  L+
Sbjct: 483 LGLEIHIGRNRIVRRIFEHLGYDVVSLDRVQYAGL-TKKDVPRGEWRYLTEKEVIQLK 539