Pairwise Alignments

Query, 321 a.a., 23S rRNA pseudouridylate synthase B from Vibrio cholerae E7946 ATCC 55056

Subject, 328 a.a., 23S rRNA pseudouridine synthase F from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  112 bits (280), Expect = 1e-29
 Identities = 94/324 (29%), Positives = 158/324 (48%), Gaps = 23/324 (7%)

Query: 4   KLQKVLARAGHGSRRELEALIRAGRVSVNGKVAVLGERLEDDNAVVRIDGHVVSVKAQEE 63
           +L K ++ +G+ SRRE + +I  GRV VNGK   +G ++   + V R+DG+++ V A E 
Sbjct: 5   RLNKFISDSGYCSRREADKMIEQGRVMVNGKRPDVGAKVTAKDKV-RVDGNLLEVNAVEP 63

Query: 64  VICRVLAYYKPEGELCTRHDPEGRRTV--FDRLPKIRGSRWISVGRLDANTSGLLLFTTD 121
           V    L   KP G + T  D   R  +  F   P+    R   VGRLD ++ GL++ T D
Sbjct: 64  VY---LLLNKPAG-IETTTDTSQRDNIISFTNYPE----RIFPVGRLDKDSEGLIILTND 115

Query: 122 GELANRLMHPSRQVEREYLVRVFGDVTEEKVRNLVRGVQLEDGMARFEDVMYAGGEGINH 181
           G++ N+++    + E+EY+V V   + ++ V  +  GV +   +       +   EG N 
Sbjct: 116 GDIVNKILRAGNRHEKEYVVTVDRPINQDFVEKMSGGVSI---LGVNTKKCFVAQEGPN- 171

Query: 182 TFYVVINEGRNREVRRLWESQGTTVSRLKRVRYGDIFLDKKLPRGGWMELDLKQVNYLRE 241
            F +++ +G NR++RR+ E+ G  V  L+R R   + L+ K+P G W  +   +V  L  
Sbjct: 172 KFRIILTQGMNRQIRRMCEALGYEVQTLQRTRIMHLSLN-KIPLGQWRNMTEPEVAELLR 230

Query: 242 LV--ELRPEKETV--LNMAPDAATRKRERTRSQKIRRAVRRHEERISATPGRSGKAPARR 297
           LV    + E+ +V     A  +A  K  + + +    A  +         G+S     R 
Sbjct: 231 LVAGSTKTEEGSVGKKRAAEASAPAKSNKPKPRTGGSAAGKSTRAGGPKGGKSTAGGKRD 290

Query: 298 KPGGESSTRNKVANQQQSSRKPRG 321
           KP  +SS R    ++  S   P+G
Sbjct: 291 KPKSQSSAR---GSRGASKGSPKG 311