Pairwise Alignments

Query, 321 a.a., 23S rRNA pseudouridylate synthase B from Vibrio cholerae E7946 ATCC 55056

Subject, 403 a.a., Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  229 bits (585), Expect = 7e-65
 Identities = 122/235 (51%), Positives = 164/235 (69%), Gaps = 2/235 (0%)

Query: 2   SEKLQKVLARAGHGSRRELEALIRAGRVSVNGKVAVLGERLEDDNAVVRIDGHVVSVKAQ 61
           S KL KVLA+AG GSR E+E LI  GR+SVNG+ A +G+R++  + V++++G  V V+  
Sbjct: 39  SPKLHKVLAQAGMGSRLEMEQLILEGRISVNGEPAHIGQRIQFGD-VIKVNGKPVRVRMT 97

Query: 62  EEVICRVLAYYKPEGELCTRHDPEGRRTVFDRLPKIRGSRWISVGRLDANTSGLLLFTTD 121
                RVLAY+KP GE+ +  DP+ R TVF RLPK+   +W SVGRLD NT GLLL T  
Sbjct: 98  PPPP-RVLAYHKPAGEVVSHDDPQNRPTVFRRLPKLMQGKWQSVGRLDLNTEGLLLLTNS 156

Query: 122 GELANRLMHPSRQVEREYLVRVFGDVTEEKVRNLVRGVQLEDGMARFEDVMYAGGEGINH 181
           GELANRLMHP   ++REY VRV G ++ E+ + L+ GV+L+DG+A+F  +   GGEG N 
Sbjct: 157 GELANRLMHPRFGLQREYAVRVLGALSNEEKQRLLDGVKLDDGVAQFASIEDGGGEGANC 216

Query: 182 TFYVVINEGRNREVRRLWESQGTTVSRLKRVRYGDIFLDKKLPRGGWMELDLKQV 236
            + V I EGRNREVRR++E+ G  VSRL R+RYG + L + L RG W+ELD + +
Sbjct: 217 WYRVTIGEGRNREVRRMFEAVGHAVSRLIRIRYGAVMLPRGLKRGVWLELDDRDI 271