Pairwise Alignments

Query, 321 a.a., 23S rRNA pseudouridylate synthase B from Vibrio cholerae E7946 ATCC 55056

Subject, 233 a.a., rRNA pseudouridine synthase from Magnetospirillum magneticum AMB-1

 Score = 98.2 bits (243), Expect = 2e-25
 Identities = 78/240 (32%), Positives = 122/240 (50%), Gaps = 21/240 (8%)

Query: 4   KLQKVLARAGHGSRRELEALIRAGRVSV-NGKVAVLGERLEDDNAVVRIDGHVVSVKAQE 62
           +L +++A  G+GS+R+++A+I+AGRV++ +G V   G +   D+  +R+DG  +      
Sbjct: 2   RLIRLIANLGYGSQRDVKAMIKAGRVTLADGTVLDDGTKAAHDD--IRVDGEPLDPPPG- 58

Query: 63  EVICRVLAYYKPEGELCTRHDPEGRRTVFDRLPKI---RGSRWISVGRLDANTSGLLLFT 119
                VL  +KPEG  C+  DP   R V++ LP+    R      VGRLD +++GLLL T
Sbjct: 59  ----LVLMLHKPEGYTCSTSDPG--RIVYELLPERFMHRNPIVAPVGRLDRDSTGLLLLT 112

Query: 120 TDGELANRLMHPSRQVEREYLVRVFGDVTEEKVRNLVRGVQLEDGMARFEDVMYAGGEGI 179
            DG LA+R+  P R V + Y V +   ++ E+      G      M R E    A  E +
Sbjct: 113 DDGPLAHRITSPKRHVPKTYEVTLARPLSGEEGAVFASGTL----MLRSESTPLAPAELV 168

Query: 180 ---NHTFYVVINEGRNREVRRLWESQGTTVSRLKRVRYGDIFLDKKLPRGGWMELDLKQV 236
                T  + I EGR  +V+R++ + G  V RL R   G + L   L  G W  L   ++
Sbjct: 169 VSGPQTARITITEGRYHQVKRMFAAVGNHVERLHRAAIGGLDLG-DLAEGQWRPLSPAEI 227