Pairwise Alignments

Query, 321 a.a., 23S rRNA pseudouridylate synthase B from Vibrio cholerae E7946 ATCC 55056

Subject, 267 a.a., ribosomal large subunit pseudouridine synthase B (EC 5.4.99.-) from Kangiella aquimarina DSM 16071

 Score =  281 bits (720), Expect = 9e-81
 Identities = 143/245 (58%), Positives = 181/245 (73%), Gaps = 1/245 (0%)

Query: 1   MSEKLQKVLARAGHGSRRELEALIRAGRVSVNGKVAVLGERLEDDNAVVRIDGHVVSVKA 60
           MSEKLQK+LA AG GSRRE+E  I  GRVSVNG +A LGER  D + + R+DG ++++K+
Sbjct: 1   MSEKLQKILANAGLGSRREIEKWIEGGRVSVNGSIAKLGERATDKDTI-RVDGRIINIKS 59

Query: 61  QEEVICRVLAYYKPEGELCTRHDPEGRRTVFDRLPKIRGSRWISVGRLDANTSGLLLFTT 120
            EE   RVLAY KP GE+ T+ DPEGR TVFD LPK    RWIS+GRLD NT+GLLLFT 
Sbjct: 60  SEETYTRVLAYNKPLGEVSTKKDPEGRPTVFDNLPKTSFGRWISIGRLDINTTGLLLFTN 119

Query: 121 DGELANRLMHPSRQVEREYLVRVFGDVTEEKVRNLVRGVQLEDGMARFEDVMYAGGEGIN 180
           +GELA+RLMHPS QVER+Y VRV G+VT E + NL +GV +E  M +F  V   GGEG N
Sbjct: 120 NGELAHRLMHPSYQVERKYAVRVHGEVTPEMINNLKKGVLIEGDMCQFTYVQEKGGEGAN 179

Query: 181 HTFYVVINEGRNREVRRLWESQGTTVSRLKRVRYGDIFLDKKLPRGGWMELDLKQVNYLR 240
             + V + EG+NREVR+LWESQG  VSRL R++YG I L ++L RG W++LD +++  L 
Sbjct: 180 TWYEVGLAEGKNREVRKLWESQGLEVSRLMRIQYGPINLPQRLSRGRWIDLDEQEIRDLA 239

Query: 241 ELVEL 245
           +LV+L
Sbjct: 240 KLVQL 244