Pairwise Alignments

Query, 321 a.a., 23S rRNA pseudouridylate synthase B from Vibrio cholerae E7946 ATCC 55056

Subject, 226 a.a., rRNA pseudouridine synthase from Fusobacterium nucleatum SB010

 Score = 91.3 bits (225), Expect = 2e-23
 Identities = 69/243 (28%), Positives = 124/243 (51%), Gaps = 29/243 (11%)

Query: 4   KLQKVLARAGHGSRRELEALIRAGRVSVNGKVAVLGERLEDDNAVVRIDGHVVSVKAQEE 63
           +L K L   G GSR+E++ LI    ++VNG   +  +   D+N+ +        ++  EE
Sbjct: 2   RLDKFLVECGIGSRKEVKKLISNNEITVNGMSNISAKDNIDENSDI--------IEYNEE 53

Query: 64  VI-CRVLAYY---KPEGELCTRHDPEGRRTVFDRLPKIRGSRWI------SVGRLDANTS 113
            +  +   YY   K  G +    D +   TV D LP+     W+       VGRLD +T 
Sbjct: 54  KLEYKKFRYYIMNKKSGYITATEDFK-ENTVMDLLPE-----WVIKKDLAPVGRLDKDTE 107

Query: 114 GLLLFTTDGELANRLMHPSRQVEREYLVRVFGDVTEEKVRNLVRGVQLEDGMARFEDVMY 173
           GLLLFT DG+L ++L+ P   V++ Y V +  ++++E +  L +GV + + +++   V  
Sbjct: 108 GLLLFTNDGKLNHKLLSPKNHVDKVYYVEIKNNISDEDIFKLEQGVDIGNYISQPAKVEK 167

Query: 174 AGGEGINHTFYVVINEGRNREVRRLWESQGTTVSRLKRVRYGDIFLDKKLPRGGWMELDL 233
                 ++  Y+ I EG+  +++++ E+    V  LKRV +G + L+  L  G   E++L
Sbjct: 168 IS----DNKIYLTIKEGKFHQIKKMLEAINNKVCYLKRVSFGRLKLN-DLALGEVREVNL 222

Query: 234 KQV 236
           + +
Sbjct: 223 EDI 225