Pairwise Alignments

Query, 321 a.a., 23S rRNA pseudouridylate synthase B from Vibrio cholerae E7946 ATCC 55056

Subject, 242 a.a., 16S rRNA pseudouridine(516) synthase RsuA from Erwinia tracheiphila SCR3

 Score = 90.5 bits (223), Expect = 4e-23
 Identities = 71/235 (30%), Positives = 123/235 (52%), Gaps = 11/235 (4%)

Query: 4   KLQKVLARAGHGSRRELEALIRAGRVSVNGKVAVLGE-RLEDDNAVVRIDGHVVSVKAQE 62
           +L K L++    SR      +RA +V+V+G+V   G  RL  +N V + DG+++    Q 
Sbjct: 2   RLDKFLSQQLEISRAIAGRELRARKVTVDGEVVRDGAFRLTAENEV-KYDGNLL----QL 56

Query: 63  EVICRVLAYYKPEGELCTRHDPEGRRTVFDRLPKIRGSRWISVGRLDANTSGLLLFTTDG 122
           E   R     KP+G +C+  DP+   T+   L +    +  + GRLD +T+GL+L T DG
Sbjct: 57  ETGPRYFMLNKPQGYVCSTDDPD-HPTILYFLEEPTAYKLHAAGRLDIDTTGLVLMTDDG 115

Query: 123 ELANRLMHPSRQVEREYLVRVFGDVTEEKVRNLVRGVQLEDGMARFEDVMYAGGEGI-NH 181
           + ++R+  P    E+ YLV +   + ++      +GVQL +     +  +    E I ++
Sbjct: 116 QWSHRITSPRHHCEKTYLVTLESPLADDVATKFQQGVQLHNEKDLTKPALL---EAISDN 172

Query: 182 TFYVVINEGRNREVRRLWESQGTTVSRLKRVRYGDIFLDKKLPRGGWMELDLKQV 236
              + I+EGR  +V+R++ + G  V  L R R GDI LD +L  G +  L+ +++
Sbjct: 173 QVRLTISEGRYHQVKRMFAAVGNHVVALHRERIGDIQLDAQLQPGEYRALNAEEI 227