Pairwise Alignments

Query, 321 a.a., 23S rRNA pseudouridylate synthase B from Vibrio cholerae E7946 ATCC 55056

Subject, 290 a.a., pseudouridine synthase from Enterobacter asburiae PDN3

 Score =  117 bits (294), Expect = 3e-31
 Identities = 85/305 (27%), Positives = 155/305 (50%), Gaps = 20/305 (6%)

Query: 2   SEKLQKVLARAGHGSRRELEALIRAGRVSVNGKVAVLGERLEDDNAVVRIDGHVVSVKAQ 61
           S +L K ++ +G  SRRE +  I  G V +NGK A +G+++   + VV+++G V+  +  
Sbjct: 6   STRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVVPGD-VVKVNGQVIEPRDA 64

Query: 62  EEVICRVLAYYKPEGELCTRHDPEGRRTVFDRLPKIRGSRWISVGRLDANTSGLLLFTTD 121
           E+++   +A  KP G + T  D E R  + D +     SR   +GRLD ++ GL+  T  
Sbjct: 65  EDLV--FIALNKPVGIVSTTEDGE-RDNIVDFVN--HSSRIFPIGRLDKDSQGLIFLTNH 119

Query: 122 GELANRLMHPSRQVEREYLVRVFGDVTEEKVRNLVRGVQLEDGMARFEDVMYAGGEGINH 181
           G+L N+++      E+EY+V V   VT+E +R +  GV +   + +   V     +    
Sbjct: 120 GDLVNKILRAGNDHEKEYIVTVNKPVTDEFIRGMGAGVPILGTVTKKCKVK----KEAPF 175

Query: 182 TFYVVINEGRNREVRRLWESQGTTVSRLKRVRYGDIFLDKKLPRGGWMELDLKQVNYLRE 241
            F + + +G NR++RR+ E  G  V++L+R R  ++ L   +P G W +L   ++  L +
Sbjct: 176 AFRITLVQGLNRQIRRMCEHFGYEVTKLERTRIMNVSL-SGIPLGEWRDLTDDELIELFK 234

Query: 242 LVELRPEKETVLNMAPDAATRKRERTRSQKIRRAVRRHEERISATPGRSGKAPARRKPGG 301
           L+E         N + +A  + + + ++Q I+R V +  +      G+ G      +PG 
Sbjct: 235 LIE---------NSSSEAKPKAKAKPKTQAIKRPVVKAPQAEDKGRGKPGNGKRFTQPGR 285

Query: 302 ESSTR 306
           +   R
Sbjct: 286 KKKGR 290