Pairwise Alignments

Query, 321 a.a., 23S rRNA pseudouridylate synthase B from Vibrio cholerae E7946 ATCC 55056

Subject, 235 a.a., pseudouridine synthase from Enterobacter asburiae PDN3

 Score = 85.1 bits (209), Expect = 1e-21
 Identities = 71/235 (30%), Positives = 117/235 (49%), Gaps = 11/235 (4%)

Query: 4   KLQKVLARAGHGSRRELEALIRAGRVSVNGKVAV-LGERLEDDNAVVRIDGHVVSVKAQE 62
           +L K +A+    SR      IRA RV+V+G +      +L+ D+ V   DG+ ++ +   
Sbjct: 2   RLDKFIAQQLGVSRAIAGREIRASRVTVDGDIVKDTAFKLQPDHQV-EYDGNPLTQQHGP 60

Query: 63  EVICRVLAYYKPEGELCTRHDPEGRRTVFDRLPKIRGSRWISVGRLDANTSGLLLFTTDG 122
               R     KPEG +C+  DP+   TV   L +    +  + GRLD +T+GL+L T DG
Sbjct: 61  ----RYFMLNKPEGYVCSTDDPD-HPTVLYFLDEPVAHKLHAAGRLDIDTTGLVLMTDDG 115

Query: 123 ELANRLMHPSRQVEREYLVRVFGDVTEEKVRNLVRGVQLEDGMARFEDVMYAGGEGINHT 182
           + ++R+  P    E+ YLV +   V+++      +GVQL +     +  +    E I  T
Sbjct: 116 QWSHRITSPRHHCEKTYLVTLESPVSDDTAEQFTKGVQLHNEKDLTKPAVL---EVITPT 172

Query: 183 -FYVVINEGRNREVRRLWESQGTTVSRLKRVRYGDIFLDKKLPRGGWMELDLKQV 236
              + I+EGR  +V+R++ + G  V  L R R G I LD  L  G +  L  +++
Sbjct: 173 EVRLTISEGRYHQVKRMFAAVGNRVVGLHRERIGAIELDPDLAPGEYRPLTEEEI 227