Pairwise Alignments

Query, 321 a.a., 23S rRNA pseudouridylate synthase B from Vibrio cholerae E7946 ATCC 55056

Subject, 232 a.a., 16S rRNA pseudouridine(516) synthase RsuA from Dickeya dadantii 3937

 Score = 88.2 bits (217), Expect = 2e-22
 Identities = 71/235 (30%), Positives = 114/235 (48%), Gaps = 11/235 (4%)

Query: 4   KLQKVLARAGHGSRRELEALIRAGRVSVNGKVAVLGERLEDDNAVVRIDGHVVSVKAQEE 63
           +L K L++    SR  +   +RA RV+VNG+V   G         V  DG+V+    +++
Sbjct: 2   RLDKFLSQQLGISRALVARELRAQRVTVNGEVIKSGAFKLLPEHEVAFDGNVL----EQQ 57

Query: 64  VICRVLAYYKPEGELCTRHDPEGRRTVFDRLPKIRGSRWISVGRLDANTSGLLLFTTDGE 123
              R     KP+G +C+  DP+   T+   + +    +  + GRLD +TSGL+L T DG+
Sbjct: 58  NGPRYFMLNKPQGYVCSTDDPD-HPTILYFIDEPVAHKLHAAGRLDIDTSGLVLLTDDGQ 116

Query: 124 LANRLMHPSRQVEREYLVRVFGDVTEEKVRNLVRGVQL--EDGMARFEDVMYAGGEGINH 181
            ++R+  P    E+ YLV +   +  +   N   GVQL  E  + R   +         H
Sbjct: 117 WSHRITSPKHHCEKTYLVTLEQPLAPDTADNFQAGVQLHGEKNLTRPATLEQIS----EH 172

Query: 182 TFYVVINEGRNREVRRLWESQGTTVSRLKRVRYGDIFLDKKLPRGGWMELDLKQV 236
              + I+EGR  +V+R++ + G  V  L R R G I LD  L  G +  L  ++V
Sbjct: 173 QVRLTISEGRYHQVKRMFAAVGNHVVALHRERIGAITLDDALEPGEYRPLTPEEV 227